Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00212 ATGTGGGAGTGCGACCATTTCAAAGCGGCCTTCTCGCGAAAACCCCAAGGCCAGGCAAATCTGTTCTCTCACAGGGGAGAGAGAGCGATGACGATGGCGATTCCGGGGAGCATTGTCGTCCTCCTTCTCCTTATGTTGCTTCTTCTCCTCCTCCTCTTCCTTCTCATTGCCTGCAAGCCATGGCGCTTCTTTTCCTTCTCTCGTTCTCGCACCATCAAGGTTCCTGACCTTGAGAGACCCCTTGTCTCTGATGCTGCGGATGACACTCAAAGCCAAACCAATGAGCTTCCTAGAGATTATGATTTGGAGGGTGCACTCCAAACTGATGGACATTTTCGGTCCCCAAGATTGTACGGGCTGATTCATAAACAAAGATCGCCATCTTCATCGCCCCATTTAAGTCAGGGTGATAGATCGTTTCCAGATGTAGTTCCCGATCATTTAGAAGTTATTTCAGTTGGTCAAACACTTAAACGAACTTACTTCGCAAACCAGATTCCAGAAATTCAAAAGCATTCAAAATTGAGCCCAGAATGTGATCAACTCCACGAAATTTCAAGTCAAGATGCCTCACATGAAAGAAGTTACCTCACTTTGGAGGTTACCTCCGGTCCTTCTCGTGGGGTGCGTTATTCAATACATTCTGCAGACACGTCTAGGCTTCCGTTGACTCTTGGAAGAGTACCACCTAGTGATTTACAGCTGAAGGATTCCGAAGTCTCAGGGAAGCACGCCTTGATAAAATGGAATCTAAATAATATGAAATGGGAGCTTGTGGACTTGGGTAGCTTAAATGGGACTTTATTAAATTCTCAACCTATCAACAATCCTGATTCTGGAAGTAGACATTGGGGTGATCCAATTGAGCTTGTGAGTGGAGATGTTATAACTCTTGGTACAACCTCCAAAGTGTATGTTCATATAACATCTCAGATTGAGAATCATATTCCCTTTGGAGTTGGGTTGGCTTCAGATCCAATGGCTTTACGTCGAGGTGGAAAAAAGCATGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTTGCTGGGGTTGATCAGTTTGGACTCTTTGGTGTCTGCGATGGACATAGTGGAGTAGGGGCCGCCAAATCTGCTAGCGAGATTCTTCCTGCGAAGGTTGCCACAATTCTATCTGATCCACTGAAAAGGGAGAGGGTAGTATCCCTTCGTGATGCTTCAGATGTTCTTAGACAAGCATTTTCTCAGACTGAAGCTTGCATGAATCACTATTATGAGGGTTGTACTGCCACGGTGCTCTTAGTATGGACTGATAGTGATGAAAATTACTTTGTGCAATGTGCGAATGTTGGGGACTCTGCTTGTGTTCTGAATGTTCATGGGAAGCGGATGAAGATGACAGAAGATCACAGAATAACTAGCATTTCAGAAAGACAACGAATAGAACAAGCAGGAGAACCACTGAAAGAGGGGGAGACTCGTTTATGTGGCTTGAACCTTGCTAGGATGCTCGGAGACAAGTTCCTTAAACAACAAGACCCTCGTTTCAGTTCCGAACCTTATATCAGTGAAGTCGTCCATATAGATCAAGGAAGCAAAGCTTTTGCAGTGATGGCAAGCGATGGCTTCTGGGATGTGATTAGCATGAAGAAGGCAATCCAGCTGGTGCATCAGGCCAGGGAGAGATACTCCGGAGGTGCAGAAAACTCAGCGGAGAAGGTTGCCAATTTTTTGTTGGGGGAGGCTAGAACACTGCGTACAAAAGATAATACATCCATAATTTTCTTAGATTTTGAGGTTTCTCATAGAATCACTTGTAAAGTTGAACCATGA 1812 44.87 MWECDHFKAAFSRKPQGQANLFSHRGERAMTMAIPGSIVVLLLLMLLLLLLLFLLIACKPWRFFSFSRSRTIKVPDLERPLVSDAADDTQSQTNELPRDYDLEGALQTDGHFRSPRLYGLIHKQRSPSSSPHLSQGDRSFPDVVPDHLEVISVGQTLKRTYFANQIPEIQKHSKLSPECDQLHEISSQDASHERSYLTLEVTSGPSRGVRYSIHSADTSRLPLTLGRVPPSDLQLKDSEVSGKHALIKWNLNNMKWELVDLGSLNGTLLNSQPINNPDSGSRHWGDPIELVSGDVITLGTTSKVYVHITSQIENHIPFGVGLASDPMALRRGGKKHAMEDVCYYQWPLAGVDQFGLFGVCDGHSGVGAAKSASEILPAKVATILSDPLKRERVVSLRDASDVLRQAFSQTEACMNHYYEGCTATVLLVWTDSDENYFVQCANVGDSACVLNVHGKRMKMTEDHRITSISERQRIEQAGEPLKEGETRLCGLNLARMLGDKFLKQQDPRFSSEPYISEVVHIDQGSKAFAVMASDGFWDVISMKKAIQLVHQARERYSGGAENSAEKVANFLLGEARTLRTKDNTSIIFLDFEVSHRITCKVEP 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1384868 1391676 - Cp4.1LG12g02220.1 Cpe12g00212 478209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00212 603 Gene3D - 191 327 - -
Cpe12g00212 603 ProSiteProfiles Forkhead-associated (FHA) domain profile. 223 274 IPR000253 GO:0005515
Cpe12g00212 603 SUPERFAMILY SMAD/FHA domain 196 307 IPR008984 GO:0005515
Cpe12g00212 603 CDD PP2Cc 331 591 IPR001932 -
Cpe12g00212 603 CDD FHA 197 305 IPR000253 GO:0005515
Cpe12g00212 603 ProSiteProfiles PPM-type phosphatase domain profile. 319 591 IPR001932 -
Cpe12g00212 603 Pfam Protein phosphatase 2C 330 584 IPR001932 -
Cpe12g00212 603 Gene3D - 328 598 IPR036457 -
Cpe12g00212 603 PANTHER PROTEIN PHOSPHATASE 2C 70 64 602 - -
Cpe12g00212 603 SMART PP2C_4 313 589 IPR001932 -
Cpe12g00212 603 Pfam FHA domain 224 299 IPR000253 GO:0005515
Cpe12g00212 603 SMART FHA_2 222 274 IPR000253 GO:0005515
Cpe12g00212 603 PANTHER PROTEIN PHOSPHATASE 2C 64 602 IPR015655 GO:0004722|GO:0006470
Cpe12g00212 603 SUPERFAMILY PP2C-like 332 591 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00212 Cpe17g00135 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00212 Cpe-Chr12:1384868 Cpe02g00310 Cpe-Chr2:1640017 1.01E-20 dispersed
Cpe12g00212 Cpe-Chr12:1384868 Cpe17g00135 Cpe-Chr17:841158 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00212 K01090 - csv:101217195 996.882