Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00231 ATGCAGTCGTCTATAGATGTGGATTTCTTCACGGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTGTGCTCTGCATATGATACTCACATTGGGGAGAAAGTTGCAATTAAGAAGATCAACGACATCTTTGAGCATGTCTCCGATGCAACTCGGATTCTTCGTGAGATAAAACTTTTAAGACTTTTGAGACATCCAGACATTGTGGAGATAAAGCACATCCTATTACCTCCATCTAGAAGAGAATTCAAGGACATTTATGTCGTGTTTGAGCTCATGGAATCTGATCTACACCAAGTTATCAAAGCAAACGATGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATATATACACACAGCTAATGTCTTCCACCGGGACCTAAAACCCAAAAATATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTGGCAAGAGTTGCTTTTAATGATACCCCTACTGCTATTTTCTGGACAGATTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTGTGTGGTTCCTTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCGGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAACGTCGTCCACCAATTAGACTTGATGACAGATTTTCTGGGAACCCCAAATGCAGAAGCCATTGCCAGGGTACGAAATGAGAAAGCTCGAAGATACTTGAGCAGTATGCGAAAGAAGAAGCCGGTTCCTTTCTCCCAGAAGTTTCCTCACGCAGATCCACTTGCACTTCGCTTGTTGGAAAGAATGTTAGCTTTCGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCTGTAACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAGATTCTCGAGTACCATCCAAAGATGTTGAAGGAATTCTTAGATGGATCTGAACCTACTGGTTTCATGTATCCAAGTGCAGTTGACCATTTTAAGAAGCAATTTGCCTTCCTTGAAGAACACTACGGAAATGGTGCAACTGTTGCTCCTCCTGAAAGGCAGCATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGATAACACGATGCAGAACTCGACACAAGTTGCAAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTTGACTAGAGTTCCTATTCAAGTTCCTCAGTCTATTCAAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCAACGTGTTACGATACAACTGCGGAGCAGCAGCAGCAGCAGCAGTGGCACCAGAAGTTCTGGAACAGCGGAGGATGATCAGAAACCCGTCCATTCCACCACCATACGCCGCTACTAACTGTTCGTATCCCAGACGAAACCCATCCTGTAAAAATGAAAGGACTGATGATGAAGCCATTGAAGGTTCAAATGGGTTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTACTGA 1683 43.26 MQSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHIGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGATVAPPERQHASLPRPCVLYSDNTMQNSTQVANDLSKCSIKEVERPQVDRTCNIPLTRVPIQVPQSIQGNGARPGKVVGNVLRYNCGAAAAAAVAPEVLEQRRMIRNPSIPPPYAATNCSYPRRNPSCKNERTDDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWY 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1545585 1551112 + Cp4.1LG12g02290.1 Cpe12g00231 478228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00231 560 CDD STKc_TDY_MAPK 18 355 - -
Cpe12g00231 560 Pfam Protein kinase domain 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00231 560 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 473 - -
Cpe12g00231 560 Gene3D Transferase(Phosphotransferase) domain 1 105 333 - -
Cpe12g00231 560 SMART serkin_6 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00231 560 MobiDBLite consensus disorder prediction 502 538 - -
Cpe12g00231 560 ProSiteProfiles Protein kinase domain profile. 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00231 560 SUPERFAMILY Protein kinase-like (PK-like) 16 314 IPR011009 -
Cpe12g00231 560 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 473 - -
Cpe12g00231 560 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Cpe12g00231 560 Gene3D Phosphorylase Kinase; domain 1 34 355 - -
Cpe12g00231 560 ProSitePatterns MAP kinase signature. 54 157 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00231 Cpe17g00119 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00845 Cpe-Chr4:7825050 Cpe12g00231 Cpe-Chr12:1545585 0 dispersed
Cpe05g01548 Cpe-Chr5:10632667 Cpe12g00231 Cpe-Chr12:1545585 0 dispersed
Cpe12g00231 Cpe-Chr12:1545585 Cpe16g00730 Cpe-Chr16:7402300 0 dispersed
Cpe12g00231 Cpe-Chr12:1545585 Cpe17g00119 Cpe-Chr17:737050 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62745 PF00069 Pkinase 3.40E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00231 - K04371 csv:101216364 1085.09