Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00294 ATGGGATCGGAGCAGTTGGTGGATGGAGGCGGGCCTCGATACGTTCAAATGCAATCGGAGCCGCCTACGGCTTCGATGTCGTCGTTCTTCTCGTTTCATCACGATGCTCCTGAGCCGACTAGGATTTTCGATGAGTTGCCGAATGCCACAATCATTTCCGTTTCTCGCCCTGATGCCGGCGATATTAGTCCCATGCTTCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTCAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTTTATTTGCATTTTGCATTAAAGAAACGGGCGTTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATCGGAGATCACACAGCAGTTCCCCAAGATGAGGATGGACCGGATGACGAGGCTGATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCATCCAGTGCTGCCCTGCCTATCATTCATCCTGCCTTAGGGAGGCAGCAGTCTATGTCTGATAGGGCTAAGAATGCAATGCAAGGGTATTTGAATCACTTTTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTGTCATTTTCACCAGAATATGGCCCAAAGTTGAAGGAGGATTATGTCATGGTGAAGCATCTACCTAAAATTGCAAAGGAAGATGACGCTAGGAAATGTTGTCTATGCCTACGGTTTGGTTGTTGTAATGACAATTGGCAAAAGTTGGCTTCTTCTTCTTCTTCTTCTTCTTATTCTCTTCCTCCTCTGGTGTGGGCTGTATTAAAACCTGGATTCTTGGCCTTGTTGGGAGATCCATTTGATACTCAACCAATGGATATTATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGACGGACGAGTATCTTTGGCTAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCAAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTGAGGCCTCCTGAGGGATGGTGTCATCCTCATCGTTTCGGTTCTTATGCACCACCAAGGGGTTTGACTGAAGATGGTAGTAAGGCTCAGTGGTTCATCGATGGCCTTGCAGCGTTTGAAGCTATTTCCGTTTCCATTGAACGGGCAAAATCGGAGATTTTCATTTGTGGTTGGTGGCTTTGCCCAGAATTGTATTTGCGGCGTCCTTTTGTTTCAAATGCTTCGTCTAGGCTCGATGATTTACTTGAAGCGAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTCGGCATCCATGAGAATGTGAGGGTATTACGTTACCCTGACCACTTCTCTAGTGGCGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCCGAACATAAAGTTGGCGATTGTCCTCCTTCAGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAGAGATGAGTTGGATCGCAGGAAATATCCCCGGATGCCATGGCATGATGTCCACTGTGCACTTTGGGGGCCACCTTGTCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAATGAGCAGGCAATTCCGTTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATAGCCGAGAGCTGGAGGTTGAAAAGAAGAGTTTTGACAATTCTAGAGGAACAACAATTCAGGATTCATTTTCTCGAGGATCATCTTTCCAGGATATTCCATTGCTTTTGCCTCAAGAGGCGGATGGACCCGATGCTGAAAATGAAGGTCCAAAATTAAACGGACTGGTGCCCGTTGGCAGTCCCCTTGATCAGCCAAGTAAGATCAGCAGCAGTCTTCCTTTCTCTTTCAGGAAGATCAAAGTTGAACCCATAGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTTGACCATTTGGATTCCCATGGAAAGTCGTCTGGAGATGGGAAAACACATCATCATGTCAAAAGCTCGGAGTTTGAGTGGTGGGAAAAACAAGATAGGGTACATCATGGTGGCTTCACAGATGAATCTGGACAAGTTGGTCCATGCGCTTCATGTCGTTGCCAGGTCATAAGAAGTGTCAGTCAGTGGTCTGCTGGGACAAGCCGAACTGAAGACAGCATTCACATTGCATATTGCTCTCTTATTGAGAAAGCAGAACATTTTATCTATATTGAGAATCAATTTTTTATATCAGGCCTCGCAGGAGATGAATCAATACGGAACCGTGTGTTAGAAGCACTCTACCGTCGGATAATGAGAGCCCACCGTGAAAAGAAGACGTTTCGGGTTATTGTTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGCGGTGCAGCATCGGTTAGAGCTATAATGCATTGGCAGTATCGAACTATATGCCGAGGACCAAATTCCATGATGCATAATCTTTATGATCTTCTTGGTTCAAAAGTACAGGAGTATATATCATTTTATGGCCTCAGATCTTATGGTAAACTCTTTGATGGTGGTCCTGTAGCTACAAGCCAGGTGTACGTACATAGTAAAATTATGATTATCGATGATTGTATCGCTTTGATTGGATCGGCTAATATCAACGACAGGAGTTTACTCGGTTCTAGGGATTCTGAGATTGCTATTGTTATTGAAGATAACGAACTCATCAATTCGTATATGGGAGAACAACCATGGAAAGCAGGAAAGTTTTGCTGGAGTCTCCGCCTTTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCTGGACAGATCGATCAAATAGTTGACCCAGTTGCTGATTCAACCTACAAGGATACGTGGATGGCAACTGCTAAGACAAATACAGCAATATACCAAGACGTTTTTTCTTGCCTACCGAGCGACCTCATAAACTCCAGAGCTGGATTGAGACAGAGCGTGGCGATGTGGAAGGAGAAACTCGGGCACACAACAATAGACTTAGGGATTGCCCCAGAGAAGCTCGAGGTCTATAAGAATGGAGAAATAGAAAAGATTGATCCAATGGAGAGATTAAGTTCAGTGAAAGGGCATCTTGTTTCCTTCCCATTGGAGTTCCTGAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA 3387 43.64 MGSEQLVDGGGPRYVQMQSEPPTASMSSFFSFHHDAPEPTRIFDELPNATIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGDHTAVPQDEDGPDDEADPLHHDESSKNRDVPSSAALPIIHPALGRQQSMSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAKEDDARKCCLCLRFGCCNDNWQKLASSSSSSSYSLPPLVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSYAPPRGLTEDGSKAQWFIDGLAAFEAISVSIERAKSEIFICGWWLCPELYLRRPFVSNASSRLDDLLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMRDELDRRKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNSRELEVEKKSFDNSRGTTIQDSFSRGSSFQDIPLLLPQEADGPDAENEGPKLNGLVPVGSPLDQPSKISSSLPFSFRKIKVEPIGPDMPLKGFVDDLDHLDSHGKSSGDGKTHHHVKSSEFEWWEKQDRVHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSRTEDSIHIAYCSLIEKAEHFIYIENQFFISGLAGDESIRNRVLEALYRRIMRAHREKKTFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPNSMMHNLYDLLGSKVQEYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELINSYMGEQPWKAGKFCWSLRLSLWSEHLGLRPGQIDQIVDPVADSTYKDTWMATAKTNTAIYQDVFSCLPSDLINSRAGLRQSVAMWKEKLGHTTIDLGIAPEKLEVYKNGEIEKIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1945418 1956093 + Cp4.1LG12g02860.1 Cpe12g00294 478291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00294 1128 MobiDBLite consensus disorder prediction 123 153 - -
Cpe12g00294 1128 SUPERFAMILY Phospholipase D/nuclease 337 611 - -
Cpe12g00294 1128 Coils Coil 98 118 - -
Cpe12g00294 1128 Pfam PLD-like domain 798 974 IPR025202 -
Cpe12g00294 1128 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 492 519 IPR001736 GO:0003824
Cpe12g00294 1128 SMART pld_4 492 519 IPR001736 GO:0003824
Cpe12g00294 1128 SMART pld_4 925 952 IPR001736 GO:0003824
Cpe12g00294 1128 PANTHER PHOSPHOLIPASE D 31 1125 IPR015679 -
Cpe12g00294 1128 SUPERFAMILY Phospholipase D/nuclease 765 975 - -
Cpe12g00294 1128 Gene3D - 251 357 IPR011993 -
Cpe12g00294 1128 Gene3D Endonuclease Chain A 755 984 - -
Cpe12g00294 1128 CDD PH_PLD 193 355 - -
Cpe12g00294 1128 PANTHER PHOSPHOLIPASE 31 1125 - -
Cpe12g00294 1128 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 925 952 IPR001736 GO:0003824
Cpe12g00294 1128 PIRSF PLD_euk 37 1128 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cpe12g00294 1128 CDD PLDc_vPLD1_2_yPLD_like_1 385 530 - -
Cpe12g00294 1128 Pfam Phospholipase D Active site motif 492 519 IPR001736 GO:0003824
Cpe12g00294 1128 Gene3D Endonuclease Chain A 380 617 - -
Cpe12g00294 1128 SUPERFAMILY PH domain-like 270 355 - -
Cpe12g00294 1128 CDD PLDc_vPLD1_2_yPLD_like_2 785 969 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00294 Cpe17g00040 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00294 Cpe-Chr12:1945418 Cpe02g01720 Cpe-Chr2:14089946 1.50E-15 dispersed
Cpe11g00895 Cpe-Chr11:7223172 Cpe12g00294 Cpe-Chr12:1945418 0 wgd
Cpe12g00294 Cpe-Chr12:1945418 Cpe17g00040 Cpe-Chr17:254675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00294 K01115 - csv:101211856 2125.9