Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00317 ATGGCATTTTGGTGGACTCTGCTTGTAATAGGATTTGCTTACGCGATCTGTAGGTTACTCTTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGATGTGATGGACGACGGTAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGAGTAAGGACACAGCAGCAAGACAAGCGAGTCCAATGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGACGAGGTCAATGATCGTGTTGCTTCAGCCAGGAAAGCACAGAAAGAATGGGCCAAAAGTAGCTTTAAGCAAAGGCGTTTGCTTTTACGCATACTTTTGAAGTATATAATTGAACATCAAGAGCTTATTTGCGAGATCTCCTCCCGTGACACTGGAAAGACAATAGTGGATGCTAATATGGGAGAAATAATGGCAACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCAGATCATGTGGAAGGGCAACACTTCACAAGAAAGCTCGCGTAGAATTTCATCCCCTTGGAGTTATTGGTGCAATAGTCCCATGGAACTATCCATTTCATAACATTTTCAATCCAGTTTCAGAACATGCAAGTTGGTCAGGATGCTTCTATGTCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCTGAGAGTTTGGTCGATGTCATAACAGGGTTTGCTGAAACAGGTGAAGCTCTAGTATCTTCAGTGGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAAGTGCTGCTGAGACACTCATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTTGATCATGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTCAAAATGTATTTGTGGTTGAATATTCATGCCTCATCTATTTTGGTGGTTGTATGCCATGGTGGTGCCATATTGTATCTATTGGTCCACCATTAGCTGGGAAGTATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTCGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTTCCACCTACCGTTATTGTTGACGTCAACCATACCATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCCATAATGAAATTCAGCACAGATGATGAAGCCGTGAGGCTTGCAAATGATTCAAGATTTGGGCTCGGCTGTGCTGTCTTTTCTGGCAGTCAGCGTCGTGCCAAGAATATTGCTTCGCAGATACGTTCTGGAAGTGTTGCAATTAATGACTTCGCCACAAATTATTTATGTCAGTCCTTGCCATTTGGTGGCGTGAAAGAGAGTGGATTTGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTCGTCAAAGCAGTCGTTGAAGATAGGTGGTGGCCATACATTCAGACTAAGCATCCTAAGCCTCTTACGTATCCTGTGGCAGACAATGCTTTCGAGTTTCAAATGTCGCTCGTTGAAGCAACATACGGGCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTCCTAAAGATGCTTTCCGAGCAGAACACTCTGGCTAAAGACAACTCTGCCGTTGATGATGGAAGTAAGAGAGCTGATTGA 1851 43.6 MAFWWTLLVIGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVRTQQQDKRVQCYEPATMKYLGYFPALSRDEVNDRVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDANMGEIMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVSEHASWSGCFYVRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKSAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVQNVFVVEYSCLIYFGGCMPWWCHIVSIGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFSTDDEAVRLANDSRFGLGCAVFSGSQRRAKNIASQIRSGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTLAKDNSAVDDGSKRAD 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2101994 2110553 - Cp4.1LG12g03290.1 Cpe12g00317 478314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00317 616 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 575 - -
Cpe12g00317 616 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 283 290 IPR029510 GO:0016491
Cpe12g00317 616 Pfam Aldehyde dehydrogenase family 61 349 IPR015590 GO:0016491
Cpe12g00317 616 Pfam Aldehyde dehydrogenase family 372 540 IPR015590 GO:0016491
Cpe12g00317 616 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 286 IPR016162 GO:0016491
Cpe12g00317 616 SUPERFAMILY ALDH-like 49 542 IPR016161 GO:0016491
Cpe12g00317 616 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 575 - -
Cpe12g00317 616 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 545 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00317 Cpe17g00066 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00317 Cpe-Chr12:2101994 Cpe18g00825 Cpe-Chr18:7639618 4.11E-64 dispersed
Cpe12g00317 Cpe-Chr12:2101994 Cpe17g00066 Cpe-Chr17:391085 1.03E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00317 - - csv:101209796 1086.25