Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00330 ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA 609 54.68 MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSAPPN 202
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 2174973 2175581 + Cp4.1LG12g03270.1 Cpe12g00330 478327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00330 202 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 14 201 - -
Cpe12g00330 202 MobiDBLite consensus disorder prediction 1 41 - -
Cpe12g00330 202 MobiDBLite consensus disorder prediction 104 127 - -
Cpe12g00330 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 190 IPR036638 GO:0046983
Cpe12g00330 202 CDD bHLH_AtIBH1_like 129 184 IPR044549 GO:0006355
Cpe12g00330 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 201 IPR044660 GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00330 Cpe-Chr12:2174973 Cpe18g00019 Cpe-Chr18:326926 1.05E-53 dispersed
Cpe11g00869 Cpe-Chr11:7036864 Cpe12g00330 Cpe-Chr12:2174973 4.92E-45 wgd
Cpe12g00330 Cpe-Chr12:2174973 Cpe17g00075 Cpe-Chr17:429216 5.43E-131 wgd
Cpe12g00330 Cpe-Chr12:2174973 Cpe03g01321 Cpe-Chr3:10747008 1.24E-78 wgd
Cpe12g00330 Cpe-Chr12:2174973 Cpe08g00146 Cpe-Chr8:956328 1.84E-80 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00330 - - csv:101220618 316.62