Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00331 ATGGAGGAGGTGAAGAAGGAAGAAGAATTGAGAAAAGGCGATCAGAATTTGATGGGAAATTCCGGATTGTTATTCGACATTCCATTAATGGATTTATTGGCCGGACAAGATTTCACCCCTTCCTTGTTCGATCTCTTGTCGGCTGCGCCACCCACTACCACTCTTCCTCCGCCGTCCTCCGCCGTGCCGGAGTCATCCGAAGTTCTCAACACCCCTCCTACTCCCAACTCCTCCGTCTCTTGCTCCTCCAATGAAAAGGTTTTTGACGCCGACGACGGCGATCTCCGGGAGAAATCCCCTTTCAATAAGCAATTAAAAGCGAAAAAAAAGAATCAAAAAAGGGTAAGAGAGCCGAGATTTGCGTTCATGACTAAAAGCGAAGTGGATCATCTCGACGACGGCTATAGATGGCGGAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCTAGAAGTTATTACCGTTGCACCACCGCCGGTTGCGGCGTTAAGAAGCGTGTTGAACGTTCCTCCGATGACCCTTCTGTCGTCGTTACCACTTACGAAGGCCAACACATCCATCAAAGCCCAATCATGCCACGTGGAGCTTTATCAGTCGCCGCCGCCGCCGCCGCCTTCGCCTCACCGCAACCGTCTCTTGTTTTCCCACAGCCGCAATATACGTACACTCCGGCGCCGCCAGTGGATGTCCGATTTGATGCCGCGTTTCATAGTTTTGGAGAAGAACGACGTCGTATTGAGGAATCTTTCCAAGACCATGGCCTTCTGCAAGATATGATCGTACCGTCCTCCGCCTTACACATCCCGGAAGAAGAATAG 822 50.49 MEEVKKEEELRKGDQNLMGNSGLLFDIPLMDLLAGQDFTPSLFDLLSAAPPTTTLPPPSSAVPESSEVLNTPPTPNSSVSCSSNEKVFDADDGDLREKSPFNKQLKAKKKNQKRVREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHIHQSPIMPRGALSVAAAAAAFASPQPSLVFPQPQYTYTPAPPVDVRFDAAFHSFGEERRRIEESFQDHGLLQDMIVPSSALHIPEEE 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2190645 2192926 + Cp4.1LG12g03320.1 Cpe12g00331 478328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00331 273 MobiDBLite consensus disorder prediction 53 98 - -
Cpe12g00331 273 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 54 230 - -
Cpe12g00331 273 SUPERFAMILY WRKY DNA-binding domain 123 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe12g00331 273 Gene3D WRKY domain 118 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe12g00331 273 SMART WRKY_cls 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe12g00331 273 Pfam WRKY DNA -binding domain 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe12g00331 273 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 230 IPR044810 GO:0003700
Cpe12g00331 273 ProSiteProfiles WRKY domain profile. 126 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe12g00331 273 MobiDBLite consensus disorder prediction 59 85 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01319 Cpe12g00331 CCT
Cpe08g00144 Cpe12g00331 CCT
Cpe03g01319 Cpe12g00331 ECH
Cpe08g00144 Cpe12g00331 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00808 Cpe-Chr3:5038203 Cpe12g00331 Cpe-Chr12:2190645 2.39E-27 dispersed
Cpe04g00481 Cpe-Chr4:5469872 Cpe12g00331 Cpe-Chr12:2190645 4.44E-38 dispersed
Cpe05g01094 Cpe-Chr5:7267769 Cpe12g00331 Cpe-Chr12:2190645 5.87E-24 dispersed
Cpe07g00080 Cpe-Chr7:389969 Cpe12g00331 Cpe-Chr12:2190645 5.74E-52 dispersed
Cpe10g00373 Cpe-Chr10:2206612 Cpe12g00331 Cpe-Chr12:2190645 3.80E-36 dispersed
Cpe11g00383 Cpe-Chr11:2106104 Cpe12g00331 Cpe-Chr12:2190645 1.24E-49 dispersed
Cpe12g00331 Cpe-Chr12:2190645 Cpe17g00078 Cpe-Chr17:448267 2.05E-64 dispersed
Cpe12g00881 Cpe-Chr12:7677612 Cpe12g00331 Cpe-Chr12:2190645 1.96E-48 dispersed
Cpe16g00053 Cpe-Chr16:726252 Cpe12g00331 Cpe-Chr12:2190645 4.31E-36 dispersed
Cpe19g00566 Cpe-Chr19:4780138 Cpe12g00331 Cpe-Chr12:2190645 8.88E-30 dispersed
Cpe12g00331 Cpe-Chr12:2190645 Cpe17g00738 Cpe-Chr17:5848872 2.17E-45 wgd
Cpe12g00331 Cpe-Chr12:2190645 Cpe02g01532 Cpe-Chr2:13032545 8.98E-38 wgd
Cpe12g00331 Cpe-Chr12:2190645 Cpe03g01319 Cpe-Chr3:10730902 2.26E-67 wgd
Cpe12g00331 Cpe-Chr12:2190645 Cpe08g00144 Cpe-Chr8:939405 3.63E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50306 PF03106 WRKY 2.50E-26 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00331 - - csv:101205991 333.954