Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00374 ATGGACGTGGGTTTGGCTTTGGTTATTGTAATGGCGGTGACGGCGTATCTTCTGTGGTTTACGTTCATTTCCCGGTCGTTAAAAGGGCCTCAAATGTGGCCGTTGCTAGGCAGCTTGCCGGGGTTGATCGAGAATTGCGACCGTTTACACGACTGGATCTCCGACAACCTCCGTGCTTGCGGCGGCACTTATCAAACATGCATTTGGGCCTTCCCTTTCTTCGCTACAAAACAGGGCCTCGTGACAGTCACGTGTGACCCGAGAAATCTGGAGCATATACTCAAGACCCGATTCGATAATTACCCTAAGGGCCCCACTTGGCAAGCTGTATTTCACGAGTTACTTGGCCAAGGTATTTTTAATTCGGATGGTGACACGTGGCTCTTCCAGAGAAAAACTGCTGCCTTGGAATTTACTACTAGGACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGTCCTATTCTTAAACAAGCCGAGCTTAATTCTCAGCCGATTGATCTTCAGGATGTGTTGTTGCGGCTTACTTTTGATAATATTTGCGGCTTGGCTTTTGGGAAAGATCCTATGACTTGCGCGCCGGGTTTCCCTGAAAATGGCTTTGCTATGGCTTTTGATCGAGCCACTGAAGCTTCGTTGCAACGGTTTATTTTGCCGGAAGTTCTTTGGAAATTTAAAAAGTGGCTTCGGCTTGGTATGGAAGTCAGCTTGAGCCGGAGTCTCGTTCATATCGAGGAGTATTTATCCAGTGTTATTGATTCACGTAAGCTCGAGTTGCTGAATCAGCTTAAAGACTCCACCCCACATGATGATTTATTGTCACGTTTCATGAAGAAGAAGGAAAGTAATTACTCCAACGCGTTTCTTCGCCATGTGGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCGCTGAGCTGGTTCTTCTGGTTGGTGACATTAAACCCACAAATTGAAGAAAAAATCCTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGCAATAATATCCAATCATGGCTGGATGAGCCGTTAGGATTTGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTTAGACTGTACCCGTCGGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACATTCTTCCCGACGGAACTTTCGTTCCGGCGGGATCGTCGGTGACTTATTCAATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTCGAATTCCGGCCGGAGCGGTGGCTGACGGCGGACGGGAAGAAATTCATACCGTACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCAAGGATCTGCTTGGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTACTTCTCCGGCACCGGCTGACGGTGGCTGCAGGGCATAAGGTGGAGCAGAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGAGTTGGAGGGAATAGTGGAAAGCATAAGGGGCAAAAAAGGAAATTCTCAAGGGAATGATACTCCGTTAGTCGCCGTTGTGAACTGTAACGGCGGGTGTAACGGTTTTAACGACGTACAACGCTAA 1656 49.15 MDVGLALVIVMAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFATKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAELNSQPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQLKDSTPHDDLLSRFMKKKESNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPQIEEKILREICTVLIETRGNNIQSWLDEPLGFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRELEGIVESIRGKKGNSQGNDTPLVAVVNCNGGCNGFNDVQR 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2678868 2680523 - Cp4.1LG12g03720.1 Cpe12g00374 478371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00374 551 PANTHER CYTOCHROME P450 86A2 7 523 - -
Cpe12g00374 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Cpe12g00374 551 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PANTHER CYTOCHROME P450 7 523 - -
Cpe12g00374 551 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 SUPERFAMILY Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00374 551 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00374 Cpe-Chr12:2678868 Cpe20g00858 Cpe-Chr20:7734937 1.28E-91 dispersed
Cpe11g00700 Cpe-Chr11:5016052 Cpe12g00374 Cpe-Chr12:2678868 1.75E-83 transposed
Cpe12g00374 Cpe-Chr12:2678868 Cpe13g00150 Cpe-Chr13:1093759 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00374 K15398 - csv:101221526 1067.76