Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00384 | ATGACTTGTGTTCTTAGAAACCATGTTAACCATGGCGGCATTCTCCTCCTCCTCCTCCTCCTCTCTCTGCCACTTCTCTCCGTCGCCGTCTCCGACGCCGAAGCTTCATTCATCGTTCGCCGCCAACTTAAAGCTTTAGAAGATTACGAAAACCTCCCAGATGACTACACATACGAACTCGACATTCCCGACACTTTCCCTAATGAGAGGTTGAAAAAGGCCTACATCGCCCTTCAAGCTTGGAAATTAGCCATTTACTCCGACCCTCTTAACATGACCGCCAATTGGGTTGGTGCCGATGTCTGCTCTTACGTCGGCGTCTTCTGTACCACGGCGCTTGATGACTCAACCATTGAAGTTGTCGCCGGCATTGATTTGAACCATGGCGATATTGCCGGCCATTTGGTGCCGGAATTAGCCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCCAATAGATTCTGTGGGATCGTTCCTCGTAGCTTCTACAAGCTCACTCTCATGTTTGAATTTGATATCAGCACCAACCGCTTCGTCGGCCGTTTCCCTGAGGTTGTTCTTGAATGGTCCGTCGTTAAGTACCTCGATCTCAGGTTCAATAACTTCGAAGGAGAAATCCCACCTGCTCTGTTCACTAAGGAATTCGATGCCATTTTCTTAAACAATAACAGATTCAATTCCTTCATCCCACATACCATCGGAAACTCCACCGTCTCTGTCGTGTCCTTCGCCTACAACGAGTTCCATGGCTGCATTCCTAACACCATCGGCAATATGCCCAACCTCAACCAGGCCCTGTTCCTCGGCAACAACCTCAGCGGGTGTTTCCCTTACGAGATGGGGAAGCTTGTGAATATGACACATATTGATGTTAGTGACAATTTGTTTGTCGGCGAGCTGCCTAAATCGTTGTCGGGGCTGCATAGCTTGGAGGTTTTGGATGTTAGTAAGAATGAATTGAGGGGCTCTGTTTTTGGGGGTGTTTGTGAGTTGCCTAAATTGATTTACTTTAATTGTTCGAGTAATTATTTTAGTGAGGAAGATGCGGCGTGTGTTGGGTCTAAAGAATCTAAGAATTCTTTTGATGATGTTGGGAATTGTTTGGGGAATCGACCGGAGCAGAGAGATGCGGCCAAGTGTAGCTCTGTTTTGGATAAACCCATGGAGTGTGGTGGCTGTGCTGATGATCCATTTGTTCAGTCTCCATCGCCCAGGTTTAGGCCGCCGCCCTCACCATCTGTGGGTGAAATCCCTTACGTAGAAGTTGGGTCTCCACCATCTCCGATTGTGTTTCCACCGCCAACATCTCACACACGAACGCCCTCTGTTCCATCCTCACCGCCACCAGTCCACTCTCCGCCACCGCCCGACCACTCTCCGCCACCGCCCGACCAGTCTCCGCCACCCCCCGTCTACTCTCCGCCTCCCCCCGTCTACTCTCCGCCTCCCCCCGTCTACTCTCCGCCACCCCCCGTCTACTCTCCGCCGCCACCAGAACAATCTCCGCCCCCACCGGTATACTCTCCACCCCCACCAGAACAATCTCCGCCCCCACCGGTATACTCTCCACCCCCACCAGAACAATCTCCGCCCCCACCCGTATACTCTCCGCCCCCACCCGTTTACTCTCCACCCCCACCCGTTTACTCTCCACCCCCACCCGTATACTCTCCACCCCCACCCGTTTACTCTCCACCCCCACCCGTTTACTCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACACTCTCCACCCCCACCCGTTTACTCTCCACCCCCACCAGAACACTCTCCACCCCCACCCGTGTACTCTCCTCCCCCACCAGAACAATCTCCGCCCCCACCCGTTCAATCTCCGCCTCCACCAGAACAATCTCCGCCCCCACCCGTTCAATCCCCGCCTCCACCAGAACAATCTCCGCCCCCACCAGAGCAATCTCCGCCGCCACCAGAACAATCTCCACCTCCTGCGATCGAAACTCCTCCTCCTGCTCCCGATTCTTCTCCACCGCCAGCGTTCGAGGACTTAATTCTCCCACCAAATATCGGCTTCCAGTATTCATCGCCGCCTCCACCACAGTTTCCTGGCTACTAA | 2607 | 54.7 | MTCVLRNHVNHGGILLLLLLLSLPLLSVAVSDAEASFIVRRQLKALEDYENLPDDYTYELDIPDTFPNERLKKAYIALQAWKLAIYSDPLNMTANWVGADVCSYVGVFCTTALDDSTIEVVAGIDLNHGDIAGHLVPELALITDLALFHINSNRFCGIVPRSFYKLTLMFEFDISTNRFVGRFPEVVLEWSVVKYLDLRFNNFEGEIPPALFTKEFDAIFLNNNRFNSFIPHTIGNSTVSVVSFAYNEFHGCIPNTIGNMPNLNQALFLGNNLSGCFPYEMGKLVNMTHIDVSDNLFVGELPKSLSGLHSLEVLDVSKNELRGSVFGGVCELPKLIYFNCSSNYFSEEDAACVGSKESKNSFDDVGNCLGNRPEQRDAAKCSSVLDKPMECGGCADDPFVQSPSPRFRPPPSPSVGEIPYVEVGSPPSPIVFPPPTSHTRTPSVPSSPPPVHSPPPPDHSPPPPDQSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVYSPPPPEHSPPPPVYSPPPPEHSPPPPVYSPPPPEQSPPPPVQSPPPPEQSPPPPVQSPPPPEQSPPPPEQSPPPPEQSPPPAIETPPPAPDSSPPPAFEDLILPPNIGFQYSSPPPPQFPGY | 868 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2744480 | 2747086 | + | Cp4.1LG12g03790.1 | Cpe12g00384 | 478381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 576 | 662 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 748 | 864 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 748 | 864 | - | - | |
Cpe12g00384 | 868 | PRINTS | Proline rich extensin signature | 397 | 413 | - | - | |
Cpe12g00384 | 868 | PRINTS | Proline rich extensin signature | 433 | 445 | - | - | |
Cpe12g00384 | 868 | PRINTS | Proline rich extensin signature | 471 | 487 | - | - | |
Cpe12g00384 | 868 | PRINTS | Proline rich extensin signature | 450 | 471 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 496 | 590 | - | - | |
Cpe12g00384 | 868 | Gene3D | Ribonuclease Inhibitor | 110 | 370 | IPR032675 | - | |
Cpe12g00384 | 868 | MobiDBLite | consensus disorder prediction | 574 | 847 | - | - | |
Cpe12g00384 | 868 | MobiDBLite | consensus disorder prediction | 402 | 539 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 496 | 590 | - | - | |
Cpe12g00384 | 868 | SUPERFAMILY | L domain-like | 84 | 350 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 12 | 392 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 398 | 511 | - | - | |
Cpe12g00384 | 868 | MobiDBLite | consensus disorder prediction | 426 | 539 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 552 | 633 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 664 | 745 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 552 | 633 | - | - | |
Cpe12g00384 | 868 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 664 | 745 | - | - | |
Cpe12g00384 | 868 | MobiDBLite | consensus disorder prediction | 574 | 868 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 576 | 662 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 12 | 392 | - | - | |
Cpe12g00384 | 868 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 398 | 511 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00154 | Cpe-Chr2:794354 | Cpe12g00384 | Cpe-Chr12:2744480 | 4.55E-06 | dispersed | |
Cpe12g00384 | Cpe-Chr12:2744480 | Cpe03g01458 | Cpe-Chr3:11620680 | 1.05E-89 | dispersed | |
Cpe18g00446 | Cpe-Chr18:5474595 | Cpe12g00384 | Cpe-Chr12:2744480 | 1.02E-118 | dispersed | |
Cpe12g00384 | Cpe-Chr12:2744480 | Cpe17g00367 | Cpe-Chr17:2640891 | 1.36E-170 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00384 | - | - | cpep:111806609 | 819.69 |