Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00387 | ATGGAGGTGCGAATCAGAGAGCGGATACAGACGCAGGCCTGCGAGTCTCCTCGAAGTCGTCTGGATGAAGTGTCAATGGAGCCCGGTCCTTTTAATCACCACATCAGGGGAGTGCCTACCCATGGGGGTCGATACATTCAGTACAATATCTATGGCAATCTATTTGAAGTTCCTAGGAAGTATATTCCTCCGATAAGGCCTGTTGGAAGAGGAGCTTATGGAATTGTCTGTGCTGCTTTGAATTCAGAAACAAATGAAGAGGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAATAGAATTGACGCTAAAAGAACCTTGCGAGAAATCAAGCTTCTTCTACACATGGAACATGATAATATTATTGGTCTTGAAGATATTATAAGACCTCCTCAGAAGGAGACTTTCAATGATGTATGCCTTGTTTATGAATTGATGGATACTGATCTGAATCAGATAATACGGTCCAATGAATCGTTGACTGATGAACATTGTCGGTACTTTGTGTACCAGTTGTTACGAGGGCTAAAATACATACATTCTGCTAACGTTCTACACCGTGATTTGAAACCGAGCAATTTGTTCGTGAATGCAAATTGTGACCTGAAAATTGGAGACTTTGGGCTTGCAAGGACAACTTCTGAAACTGATTTTATGACTGAGTATGTTGTTACTCGGTGGTATCGTGCACCTGAATTGCTTCTTAATTGTTCAGAATACAGTGGAGCAATTGATATCTGGTCTGTTGGCTGTATATTTGGTGAAATTATGCACAGACAACCACTGTTTCCTGGAAGAGACTATCTCATTGGATCACCCGATGACTCGAGCCTCGGATTCTTACGAAGCGACAATCCACAAAAATATTTTAGACTTCTTCCTCACTTCCCCAGGCAACAGTTTTCCACTCGATTTCCCACCATGTCTCCTGCTGCAATCGACTTGCTGGAGAAGATGCTCGTCTTCGATCCTACAAAGCGCATTACAGTTGATGAGGCACTGTGCCATCCTTACTTAGCACCTCTTCATGATACCAATGTGGAGCCAGTATGTCCAAGGCCCTTCAGTTTTGATTTCGAGCAGCCATCGTATACTGAAGAACACATTAAGGAACTTGTATGGAGAGAATCCATGAAGTTCAACCCGGATCCCGCTAACTGA | 1161 | 42.89 | MEVRIRERIQTQACESPRSRLDEVSMEPGPFNHHIRGVPTHGGRYIQYNIYGNLFEVPRKYIPPIRPVGRGAYGIVCAALNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLLHMEHDNIIGLEDIIRPPQKETFNDVCLVYELMDTDLNQIIRSNESLTDEHCRYFVYQLLRGLKYIHSANVLHRDLKPSNLFVNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYSGAIDIWSVGCIFGEIMHRQPLFPGRDYLIGSPDDSSLGFLRSDNPQKYFRLLPHFPRQQFSTRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDTNVEPVCPRPFSFDFEQPSYTEEHIKELVWRESMKFNPDPAN | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2759463 | 2764530 | - | Cp4.1LG12g03850.1 | Cpe12g00387 | 478384 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00387 | 386 | ProSitePatterns | MAP kinase signature. | 97 | 200 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cpe12g00387 | 386 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 37 | 385 | - | - | |
Cpe12g00387 | 386 | Gene3D | Transferase(Phosphotransferase) domain 1 | 146 | 366 | - | - | |
Cpe12g00387 | 386 | SMART | serkin_6 | 62 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe12g00387 | 386 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe12g00387 | 386 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED | 37 | 385 | - | - | |
Cpe12g00387 | 386 | ProSiteProfiles | Protein kinase domain profile. | 62 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe12g00387 | 386 | ProSitePatterns | Protein kinases ATP-binding region signature. | 68 | 92 | IPR017441 | GO:0005524 | |
Cpe12g00387 | 386 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 346 | IPR011009 | - | |
Cpe12g00387 | 386 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 376 | - | - | |
Cpe12g00387 | 386 | Pfam | Protein kinase domain | 66 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00357 | Cpe-Chr5:1990847 | Cpe12g00387 | Cpe-Chr12:2759463 | 0 | dispersed | |
Cpe12g00387 | Cpe-Chr12:2759463 | Cpe20g00780 | Cpe-Chr20:6989381 | 0 | dispersed | |
Cpe12g00387 | Cpe-Chr12:2759463 | Cpe13g00136 | Cpe-Chr13:984706 | 0 | wgd | |
Cpe12g00387 | Cpe-Chr12:2759463 | Cpe17g00371 | Cpe-Chr17:2686582 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62751 | PF00069 | Pkinase | 4.60E-68 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00387 | K20600 | - | csv:101215189 | 664.84 |