Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00430 ATGTCCTTGAGTACCCAAATTGATAGCCTTTGGGTCTTCGCGTTGGCTTCCAAATGCTCCTCTCTCTCCAAAGACACCCTCCTTTGCTCACTCCTCTGTCTTCTCCTTATTTGCTTTCTCCTTTCTATTTTCCACTGGGCCCATCCTGGCGGCCCTGCTTGGGGCTCCCACGGATGCTACCGCCGCACCGCCGCCGTCATCCCTGGCCCAAGAGGCCTCCCACTCATCGGGAGCATGACCTTGATGATGGGTCTGGCCCACCAACGAATCGCCGCCATCGCCAAATCCCTAGGAGCTACCCGTCTCATGGCTTTCTCACTCGCCTACACTCGCGTCATTGTCACTTCTCATCCCGACGTTGCTAAAGAGATCCTTAACAGCTCCCTCTTTGCTGACCGTCCGATTAAGGAATCTGCTTACTCTTTGATGTTCAATCGCGCCATTGGTTTCGCCCCTTATGGCCTCTACTGGCGGACCCTCCGCCGTATCGCTTCCCACCATCTCTTCTCCCCTAAACAAATCAAATCCTCTGAGTCACACCGCCGCCATATCGCTTCCCAAATGCTCGCAATCTTCTCTTCCACCACCACCTCCTCCACCCACCGCGTCCGCGACACGCTCAAACGAGCCTCTTTAAACAGCATGATGGCCTCCGTCTTCGGCCGCTTTTATACCCTCACCGACTCCAATAACGAAGCCGAACAACTCCAAACCCTTGTCGCCGAAGGCTACGATTTATTGGGCCTTCTCAACTGGTCCGACCATCTCCCCTTCTTAGCCGATTTCGACCCACAGAGAATCCGGTTCAGATGCTCCCAATTGGTCCCCCAAGTGAACCAACTCGTCGGCCGGATCATCGCGGAACACCGGTCCAATTCAACCCCCCAACAAATCACGGATTTCGTCGACGTTCTTCTCTCTCTTCAACAATCTGACAATCTCTCTGACTCCGACATCATAGCCGTTCTTTGGGAAATGATATTTAGGGGTACGGACACGACGGCGGTATTAATGGAGTGGATTCTGGCGAGGATGGTTGTTCACACGGAGGTGCAAGAAAAGGTACAATCGGAACTAGACACGGTGGTTGGGAGATCACGTGGCGTCGTGGAATCCGACATTCCGTCGCTGCTTTATCTAACCGCGGTGGTTAAAGAAGTTCTAAGGTTACACCCACCGGGCCCACTTTTATCCTGGGCTCGCTTAGCCATCACTGACACAACCATCGACGGTCACCACGTGCCTAAGGGCACCACTGCCATGGTTAACATGTGGTCGATAGCACGAGACCCACAGGTCTGGTCAGACCCACTTGAATTTAAACCCGACAGGTTTGTGTCTGGTGGCGCTGACGTGGAGTTTTCAGTTATGGGTTCAGATCTACGGCTCGCTCCATTCGGGTCGGGTCGGAGAACTTGCCCCGGAAAGGCTCTTGCTTGGACAACTGTCATCTTCTGGGTGGCTACACTCTTACACGAGTTTAAATGGTTGCCTTCTCCGAACCAAAACGACGCCGTCGACTTCTCTGAAGTTCTCAAGCTCTCTTGCGAGATGGCCAATCCACTCACCGTTAAACTATGCCCAAGGCGTAATTCAAGCTTTTAA 1605 53.27 MSLSTQIDSLWVFALASKCSSLSKDTLLCSLLCLLLICFLLSIFHWAHPGGPAWGSHGCYRRTAAVIPGPRGLPLIGSMTLMMGLAHQRIAAIAKSLGATRLMAFSLAYTRVIVTSHPDVAKEILNSSLFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFSPKQIKSSESHRRHIASQMLAIFSSTTTSSTHRVRDTLKRASLNSMMASVFGRFYTLTDSNNEAEQLQTLVAEGYDLLGLLNWSDHLPFLADFDPQRIRFRCSQLVPQVNQLVGRIIAEHRSNSTPQQITDFVDVLLSLQQSDNLSDSDIIAVLWEMIFRGTDTTAVLMEWILARMVVHTEVQEKVQSELDTVVGRSRGVVESDIPSLLYLTAVVKEVLRLHPPGPLLSWARLAITDTTIDGHHVPKGTTAMVNMWSIARDPQVWSDPLEFKPDRFVSGGADVEFSVMGSDLRLAPFGSGRRTCPGKALAWTTVIFWVATLLHEFKWLPSPNQNDAVDFSEVLKLSCEMANPLTVKLCPRRNSSF 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3286711 3288825 - Cp4.1LG12g04240.1 Cpe12g00430 478427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00430 534 PANTHER CYTOCHROME P450 78A6 4 532 - -
Cpe12g00430 534 Pfam Cytochrome P450 68 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 Gene3D Cytochrome P450 58 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 SUPERFAMILY Cytochrome P450 67 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Cpe12g00430 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00430 534 PANTHER CYTOCHROME P450 78A7-RELATED 4 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00092 Cpe-Chr7:446237 Cpe12g00430 Cpe-Chr12:3286711 1.51E-176 dispersed
Cpe12g00430 Cpe-Chr12:3286711 Cpe20g00084 Cpe-Chr20:447622 1.23E-175 dispersed
Cpe16g00059 Cpe-Chr16:829107 Cpe12g00430 Cpe-Chr12:3286711 5.65E-167 transposed
Cpe12g00430 Cpe-Chr12:3286711 Cpe17g00404 Cpe-Chr17:3008182 4.56E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00430 K20619 - csv:101216159 829.32