Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00505 ATGGGATCGTGCCTCTCTGGGGACCGCAATAATCACGCGATCCCTTATTCTGAGATCGCTTCCACTTCTCGTGGTGATGGCGTTGTTACCAGAAGCAACTCCAATAGGAAGATTACGAAAAAGTGTTCTTCTCCCTCTATTGACTCTCCAAGGGAGATGTCGCTTCATCGAGTTCCTGGCCGGATGTTTTTGAATGGATCAACTGATCATGCCTCGCTCTTTACCAGGCAAGGCAAGAAAGGCATCAATCAGGACGCTATGATTGTTTGGGAGAATTTTGGTTCAAAAGCAGATACAATATTTTGCGGAGTCTTTGATGGACATGGTCCTTTCGGCCATATGGTTGCAAAGAAAGTCAGAGACTCTCTTCCTCTAAAACTGAGTGCACAATGGGAATTGGGATGTCAAGTCTCTCCACCAGTGCTGGTTAACAAGGATTCTGGAACCTCTCATTGCGATCCTGGTCGTCTGGGCAGTTCCAATGACATTCATGTCATGTTGAAAGAGTCTTTTCTGAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACATCCATATATCGATTGCTATACCAGTGGTACAACATCAGTTGCTTTGATCAAACAGGGTCGGGATCTTATCATCGGAAATGTCGGGGACTCGAGGGCTGTTTTAGGTACCAGAGATCAATCGAACTCCCTCATTGCAGTTCAGTTGACTGAGGACCTCAAGCCAAATCTTCCAAAATTCTCTATTGATCTTGAAATTCTGATTCCTCCTCTGAATAAGGAAACAGTGGTTAGTGATTCTCCTGGCCTTGCTATGGCCAGAGCCTTCGGAGATTTCTGTTTGAAAGACTTTGGCTTGATAGCCGTCCCTGATGTTTCTTGTCATCATCTTAATGAGAAAGATGAGTTTGTTGTACTGGCTACCGATGGGGTTTGGGATGTACTTTCAAACGAAGAGGTTGTGGCAATTGTTGCATCTTCTCCAAGATCCTCTGCAGCTCGTATCGTTGTGGACACGGCTTCTCGAGCATGGAGATCGAAGTACCCTACTGCCAAGGTGGATGATTGTGCCGTAGTCTGCTTGTACCTGGACTCTAGCGAGAGTGCTACAGTGACAACTCAGGAGCAGCAGGAGCTCACCAGAGACATGGAAACTTAG 1149 46.04 MGSCLSGDRNNHAIPYSEIASTSRGDGVVTRSNSNRKITKKCSSPSIDSPREMSLHRVPGRMFLNGSTDHASLFTRQGKKGINQDAMIVWENFGSKADTIFCGVFDGHGPFGHMVAKKVRDSLPLKLSAQWELGCQVSPPVLVNKDSGTSHCDPGRLGSSNDIHVMLKESFLKAFKVMDKELKLHPYIDCYTSGTTSVALIKQGRDLIIGNVGDSRAVLGTRDQSNSLIAVQLTEDLKPNLPKFSIDLEILIPPLNKETVVSDSPGLAMARAFGDFCLKDFGLIAVPDVSCHHLNEKDEFVVLATDGVWDVLSNEEVVAIVASSPRSSAARIVVDTASRAWRSKYPTAKVDDCAVVCLYLDSSESATVTTQEQQELTRDMET 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4951761 4956915 - Cp4.1LG12g05150.1 Cpe12g00505 478502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00505 382 MobiDBLite consensus disorder prediction 24 50 - -
Cpe12g00505 382 CDD PP2Cc 70 360 IPR001932 -
Cpe12g00505 382 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 369 - -
Cpe12g00505 382 PANTHER ALPHABET, ISOFORM E-RELATED 1 369 - -
Cpe12g00505 382 Pfam Protein phosphatase 2C 84 327 IPR001932 -
Cpe12g00505 382 SMART PP2C_4 59 358 IPR001932 -
Cpe12g00505 382 MobiDBLite consensus disorder prediction 24 53 - -
Cpe12g00505 382 ProSiteProfiles PPM-type phosphatase domain profile. 70 360 IPR001932 -
Cpe12g00505 382 SUPERFAMILY PP2C-like 70 361 IPR036457 -
Cpe12g00505 382 Gene3D - 63 367 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00505 Cpe-Chr12:4951761 Cpe14g00830 Cpe-Chr14:6723905 3.39E-122 dispersed
Cpe12g00505 Cpe-Chr12:4951761 Cpe17g00991 Cpe-Chr17:7521732 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00505 - - csv:101222320 598.971