Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00525 ATGGAATTAGGAATTTCCAAAATTCAGCGACCAGGATCAGGGGGCGATTTGCCCCAGGGTGGCGAGTTCAACCCTTATCCTATTGCACGGAGGGTAAATTCCTCTCATACCGTGGTCATGGATGATGACATTGAGAGTGCTAGTTTGGGGGTATACCAAGACAGACCAAGGACTTTCCCCGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTGTTCGCATTTGGATTAATATTCTACGTTGGAGCAAGAACTTCCCCTATTATTGTGTTTGTCTTCTCGGTTTGCATTGTCAGCTTCTGCTTTTCAATATATCTCACCAAATGGGTGCTCTCGAAAGATGAAGGGCCACCGGAGATGGCTCAGATTTCAGAAGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGATTAGGGAGGTCAACAACTGCCTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGCTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCGAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCGAGGGAGGCATTGCAGATCGCTGTTCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTTCCTTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACCGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGGGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTATACTAAAGCTGCTGATGTTGGAGCAGACCTTGTTGGAAAGGTTGAGCAGGGGATACCAGAAGATGATCCTAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGACAATGTGGGTGATTGTGCCGCCCGAGGTGCAGATCTTTTTGAAAGCATTGCTGCTGAAATCATTAGTGCCATGATACTTGGGGGAACAATGGCTCAACGCTGTAAAATTGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCTATCCGGAGGGGTACTCGTGAATCTGGTGTGAAGAGTCCGGTAGAGGATCCAATGACTATTCTGCAGAGAGGATATTCTGTCACTATTGTTTTGGCTGTTATAACATTTGGCGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCTGTGCGTTCATTAGCACTTTCTAGCTCCACAGGCCATGGGACAAACATAATTGCTGGAGTCAGCTTGGGCCTGGAATCAACAGCACTTCCCGTTCTTGTTATTAGTGTTTCTATTGTTTCAGCTTTCTGGTTGGGTCGCACATCAGGACTTGTGGACGAAGATGGAAATCCAACGGGTGGGCTATTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAAATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAATACAACTAAAGCTACCACAAAAGGTTTTGCCATTGGCTCTGCAGCCCTTGCATCCTTCCTACTTTTTAGTGCTTATATGGATGAGGTAGCTACATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTATCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTTAGAAAACAGTTCCTTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGAATATGGACGTTGCGTTGCTATTGTAGCATCAGCATCTCTAAGGGAAATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCCATGGCAGTTGGCTTCCTCTTTAGAATATTGGGACACTACACCGGGCAACCGCTTCTAGGGGCCAAGGTCGTTGCTGCGATGCTGATGTTCGCAACAGTTTCCGGTATTCTCATGGCCCTTTTTCTTAACACAGCAGGGGGTGCCTGGGACAACGCCAAGAAGTATATAGAGACTGGGGTTCTTGGAGGCAAAGGTAGCGATAGTCATAAAGCAGCCGTAACCGGGGACACCGTTGGTGACCCATTCAAGGACACAGCAGGGCCTTCCCTTCACGTTCTGATAAAAATGCTCGCAACCATAACGCTGGTGATGGCCCCGATCTTTCTCTAA 2523 45.9 MELGISKIQRPGSGGDLPQGGEFNPYPIARRVNSSHTVVMDDDIESASLGVYQDRPRTFPDMRSKVNTPLIFRILMGINIRVLLVLLLFAFGLIFYVGARTSPIIVFVFSVCIVSFCFSIYLTKWVLSKDEGPPEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSGLGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYASFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKSPVEDPMTILQRGYSVTIVLAVITFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEDGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAHEPFKQVDIAIPEVFVGGLLGSMLIYLFSAWACSAVGRTAQEVVKEVRKQFLERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFRILGHYTGQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDSHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5399897 5410838 + Cp4.1LG12g09840.1 Cpe12g00525 478522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00525 840 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 102 840 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe12g00525 840 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 57 840 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe12g00525 840 PIRSF H+-PPtase 99 840 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe12g00525 840 PANTHER INORGANIC DIPHOSPHATASE-RELATED 57 840 - -
Cpe12g00525 840 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 107 839 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe12g00525 840 Pfam Inorganic H+ pyrophosphatase 114 835 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00525 Cpe-Chr12:5399897 Cpe18g00526 Cpe-Chr18:5942509 1.11E-151 dispersed
Cpe12g00525 Cpe-Chr12:5399897 Cpe04g01213 Cpe-Chr4:10262933 6.14E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00525 K23025 - csv:101217198 1446.41