Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00580 | ATGGCGAATTTCCATCGATGTTCTTCTGTTTTCTTCTTCTTCTTCCTCTGTTTTCTCCCTGTAATTTTCTCTCGATCGTCGGATAAACAAGAGACTTTCATCGTTCACGTTTCTAGATCGGAGAAGCCTTCTCTGTTCTCCTCTCATTATCGCTGGCACTCGTCAATTCTCGATTCACTCTCTCCTTCTTCTCGTCCGAGGAAGCTTCTTTACAACTATGAACGTGCCGCTAATGGTTTCGCCGCACGCATCACGGATGCTCAGGCGGCGGAGTTGCGTCGTGTTCCAGGTGTTGTTTCGGTTATTCCGGATCGGATGCGTCAGCTTCATACGACTCGGACGCCTCATTTTTTAGGTCTGGCGGATAACCTAGGGCTTTGGCCTGACACTAATTATGCGGATGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGCGGCCGAGTTTCTCTGATGAGGGTTTGTCTCCGGTGCCGGCAAGTTGGAAAGGAACCTGCGAGGCTGGGGAGGGATTTTCGGCTACCACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTTCTTTCACGGATACGAATCTAATATAAGAAGACCGCTTCACGGTTTGTCCGATTTCAAATCTGCTAGGGATTCGGACGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAGAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGCATGGCGAGCAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTACGATTCTGACATCCTCGCCGCTATGGATCAGGCGATTGCCGATGGAGTCCACATCATCTCTCTCTCAGTCGGATCATCGGGCCGTGCCCCTGCGTACTATAGAGATTCTATCGCAATCGGAGCGTTTGGCGCGATGCAGCACGGCATTGTCGTCTCTTGCTCCGCCGGAAACTCCGGTCCCGGTCCTTACACGGCTGTGAATATCGCTCCATGGATCCTCACTGTTGGTGCATCCACAATTGACAGGGAGTTTCTCGCCGATGTGATTCTTGGAGACGGTAGGGTTTTTAGCGGCGTGTCGCTCTACTCCGGAGATCCTCTTGGCGATTCCAAGCTTCCGCTGGTCTACGGTGGAGATTGCGGTAATAGGTATTGTTATTCTGGATCCCTCGATCCGTCAAAAGTTGCCGGGAAAATTGTCGTGTGCGATCGAGGAGGGAACGCCAGAGTCGCCAAAGGAAGCGCCGTGAAATCCGCCGGCGGTCTTGGTGTGATACTCGCCAACACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCGGGAACAATGATTGGAGAAATCGCCGGTAACAAGCTTAGAGACTACATCCATTCGGATCCGAATCCATCTGCTACAATCGTGTTTCGAGGAACTGTTATTAGCGATTCGCCGCCGTCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCTAACTACCGAACGGCGGAGATTCTGAAACCGGACGTTATAGCTCCAGGAGTTAACATTTTGGCTGGCTGGAGCGGCTACAACAGTCCGTCTAGTCTTAGCATCGATACTCGAAGAGTTGAGTTCAATATCATCTCTGGAACTTCAATGTCCTGCCCTCACGTCAGCGGCGTCGCTGCATTGCTCCGGAAGGCTTTTCCGACATGGACACCGGCAGCAATCAAATCTGCTCTGATCACCACTTCTTACTCCTTGGACACTTCCGGCCGCCCAATCAAAGATCTCTCCACCAGCAACGACTCAAATCCGTTCGTCCATGGCGGCGGCCATATCGATCCCAACAAAGCTCTGAATCCAGGCCTGATTTATGATCTCAATCCTCAGGACTACGTTTCATTTCTCTGCTCAATCGGTTACGATTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCTAACCTATGTGAACACAAATTGAGCAATCCCGGCAATCTGAACTACCCATCATTCGCGGTCGTGTTCACTTCCAACGGCGAAGAGGTGGTGAAATATACAAGAACTGTCACAAATGTAGGAGATAAAGCCGATGCTGTTTATGAAGTGAAAGTAGAAGCCCCTCAAGGCATTGAAATCAGTGTTCTTCCAAACAAACTGGAGTTCAGCGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGAACTCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGTCACATCGTTAGGAGTCCAATTGCTGTCTCATTCAACACTGCATCCATAGCTTCGATGTAA | 2316 | 49.83 | MANFHRCSSVFFFFFLCFLPVIFSRSSDKQETFIVHVSRSEKPSLFSSHYRWHSSILDSLSPSSRPRKLLYNYERAANGFAARITDAQAAELRRVPGVVSVIPDRMRQLHTTRTPHFLGLADNLGLWPDTNYADDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCEAGEGFSATTCNRKIIGARAFFHGYESNIRRPLHGLSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCYDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGIVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGDPLGDSKLPLVYGGDCGNRYCYSGSLDPSKVAGKIVVCDRGGNARVAKGSAVKSAGGLGVILANTEENGEELLADSHLIPGTMIGEIAGNKLRDYIHSDPNPSATIVFRGTVISDSPPSPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYNSPSSLSIDTRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWTPAAIKSALITTSYSLDTSGRPIKDLSTSNDSNPFVHGGGHIDPNKALNPGLIYDLNPQDYVSFLCSIGYDSRQIAVFVKDSSYSNLCEHKLSNPGNLNYPSFAVVFTSNGEEVVKYTRTVTNVGDKADAVYEVKVEAPQGIEISVLPNKLEFSAKKTTQSYEITFTKISGFKNSASFGSIQWSDGSHIVRSPIAVSFNTASIASM | 771 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 5872029 | 5874344 | + | Cp4.1LG12g09230.1 | Cpe12g00580 | 478577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00580 | 771 | Pfam | Fibronectin type-III domain | 662 | 761 | IPR041469 | - | |
Cpe12g00580 | 771 | CDD | Peptidases_S8_3 | 108 | 579 | IPR034197 | - | |
Cpe12g00580 | 771 | Gene3D | - | 344 | 481 | - | - | |
Cpe12g00580 | 771 | SUPERFAMILY | PA domain | 364 | 465 | IPR046450 | - | |
Cpe12g00580 | 771 | Pfam | Subtilase family | 134 | 582 | IPR000209 | GO:0006508|GO:0008236 | |
Cpe12g00580 | 771 | Gene3D | Peptidase S8/S53 domain | 135 | 626 | IPR036852 | GO:0004252|GO:0006508 | |
Cpe12g00580 | 771 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 613 | - | - | |
Cpe12g00580 | 771 | Gene3D | - | 630 | 764 | - | - | |
Cpe12g00580 | 771 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 543 | 553 | IPR023828 | - | |
Cpe12g00580 | 771 | Pfam | Peptidase inhibitor I9 | 32 | 110 | IPR010259 | - | |
Cpe12g00580 | 771 | Pfam | PA domain | 375 | 459 | IPR003137 | - | |
Cpe12g00580 | 771 | SUPERFAMILY | Subtilisin-like | 109 | 617 | IPR036852 | GO:0004252|GO:0006508 | |
Cpe12g00580 | 771 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 765 | IPR045051 | - | |
Cpe12g00580 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Cpe12g00580 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 212 | 225 | IPR015500 | - | |
Cpe12g00580 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 542 | 558 | IPR015500 | - | |
Cpe12g00580 | 771 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.6 | 20 | 765 | - | - | |
Cpe12g00580 | 771 | CDD | PA_subtilisin_like | 350 | 473 | - | - | |
Cpe12g00580 | 771 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 110 | IPR037045 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00580 | Cpe17g00453 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00054 | Cpe-Chr6:275921 | Cpe12g00580 | Cpe-Chr12:5872029 | 3.08E-176 | dispersed | |
Cpe12g00580 | Cpe-Chr12:5872029 | Cpe16g00312 | Cpe-Chr16:4999551 | 0 | dispersed | |
Cpe12g00580 | Cpe-Chr12:5872029 | Cpe17g00453 | Cpe-Chr17:3377017 | 0 | wgd | |
Cpe12g00580 | Cpe-Chr12:5872029 | Cpe18g00316 | Cpe-Chr18:4681499 | 0 | wgd | |
Cpe12g00580 | Cpe-Chr12:5872029 | Cpe04g01018 | Cpe-Chr4:9065992 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00580 | - | - | csv:101205194 | 1338.17 |