Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe12g00606 | ATGGCGGACCATTCTTCCAATCGCGATACTGATTCAGGGTTCGATCATAGCTCATCCCAACCGCGTCTTTACAACCCCTACAAGGATCTCCAGGTTCCTTATCGAAATTTCCAGCTTCCAACCTCCCCGGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAACCTCACCTTCTACACGGGTTGCGGTTACCTCGCTGGTGCAGTCGGCGGCGCGTCTACAGGCTTCGTCTCCGGCGTCAAGTCTTTTGAATCAGGTGATACGATGAAACTACGGATCAATCGGATCTTGAACTCGTCTGGTCATTCAGGGCGTCTCTGGGGGAATCGTCTGGGCGTGATTGGGCTGCTATATGCTGGTTTGGAGAGCGGGTTTGAAGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCTGCGGGACTTGGCACCGGTGCGCTTTATCGTGCAGCAAGAGGGGTTAGATCGGCGGCAGTGGCCGGCGCTATTGGCGGCGTCGTGGTTGGTATGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATATGA | 573 | 55.5 | MADHSSNRDTDSGFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTGKQMLKRYVPI | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 6042466 | 6043038 | + | Cp4.1LG12g09010.1 | Cpe12g00606 | 478603 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe12g00606 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cpe12g00606 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 15 | 190 | - | - | |
| Cpe12g00606 | 190 | PANTHER | TIM23 | 15 | 190 | IPR045238 | GO:0022857 | |
| Cpe12g00606 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00023 | Cpe-Chr4:212033 | Cpe12g00606 | Cpe-Chr12:6042466 | 1.11E-70 | dispersed | |
| Cpe05g00848 | Cpe-Chr5:5525959 | Cpe12g00606 | Cpe-Chr12:6042466 | 1.86E-70 | dispersed | |
| Cpe07g01033 | Cpe-Chr7:9310594 | Cpe12g00606 | Cpe-Chr12:6042466 | 3.73E-06 | dispersed | |
| Cpe11g01138 | Cpe-Chr11:9446521 | Cpe12g00606 | Cpe-Chr12:6042466 | 5.68E-06 | dispersed | |
| Cpe12g00606 | Cpe-Chr12:6042466 | Cpe04g01096 | Cpe-Chr4:9531974 | 9.78E-06 | dispersed | |
| Cpe12g00606 | Cpe-Chr12:6042466 | Cpe17g00473 | Cpe-Chr17:3526139 | 2.36E-119 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe12g00606 | K17794 | - | csv:101221925 | 348.206 |