Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00619 ATGAAATCTGCGGAAGCTTCCTATGAATTTGGGACTCTGATGGGGTTTCGATTACTGTTTCTACTGTTTGAAATTTGTTTTGCTGTTGGTTCTTTCTCTGTCTGTGAAGCTGCAGACAATGCTGTCACTCCGACATCTCATGGCTTTGGCAGGAAACAGCATGGCAAGTCGGATAATGCTGTTCTTAGCAAACCATTTAAAAGTTCATCTCTTCAGATCCATTTTGGTCTATTCAATCAGTTGATTCAAGTAGAGCTCCTAGCATTGCACTTCCTCCTACCATGTCTGCTAAGAAATGGGGGCATGCTCATGCATTCTCACCATTCATCAATTTTCATAAACTACACCATTCAAGAAGGAAGTTCAGAAACAAACCTCCACAACCTTCCTATCATGCATCGCCCCCTGCCCATTCCAGCTCCCACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGCATGCCACCATCACAAGCTATGATGCTACCACCTCCACCTCCTAATGGGGATTGTACAATATCATGTACAGAGCCATTGACGTATACGCCTCCCGGGATGCCATGCGGTTGCGTGTGGCCAATTCAAGTCAAAATCAGCCTCAACGTTGCAGTATACACATTTTTCCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGATAGTATCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCAAGTCAGCAGTTAGAAAAAACAACTGTTCTCATCAACTTGGTTCCAAGAAGATCAAGATTCGATCATAACACGGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGGTATCAATCAAAGCTTCTTTGTTTGGTAGATATCAAGTACTAGATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTCGGCACCTTTAGGTACTTCCTCCATTAATGATGGTTTGAACACCAGCAATATTAATGCAGGAAATGCAATTAAACCGTTGGGAGTCGACGTGCCGAGACGAAGAAAAGAAGGGCTTGGCAGGAACATGATTGTGGTGATTACTATATCATCGTTCACTGCCTTTGTCATGTGTGTTGGACTTGCTTGGCTTTGCCTTTTGAGATGCAGAGTGCCTGCACATCATCCAGCACACATTCCACACAACCTGATAGCCTCACCTGCAAAACCCCCAGGCACGGATGGATCGAGAATGGCTGGAAGTGAACTGGGTTCTTCGTCTATGCCTCTCAACGACGATCCTATGACGTATATCGGGGCAGCAAAGCACTTCACCTTGAAAGACATGGAGAATGCCACTGATAACTTCGACTCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCCGTTTAGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTTAAAAGACATAATCAACATGGTATTCAGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATCGGAATTTGTACCGAAGATCGAAATCGTTGCCTGGTATACGAATTGGTTCCTAATGGAAGTGTTGAATCACACTTACATGGCATTGACAAGTTAATCAGTCCACTTGACTGGGATGCCCGCTTGAAGGTTGCCCTCGGTGCTGCTCGAGGCCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATGTGACTTCACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTTATGGGAACTTTTGGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCGGAAGTGTCTCATAGACCATTTATGGGTGAGGTTGTTCAAGCCCTGAAACTCGTGTGCAGTGAGTTCGAGAAACTAACAGACCAGTTTCACGAAGTTACAGCCGAGACAAACTTGTAA 1971 44.44 MKSAEASYEFGTLMGFRLLFLLFEICFAVGSFSVCEAADNAVTPTSHGFGRKQHGKSDNAVLSKPFKSSSLQIHFGLFNQLIQVELLALHFLLPCLLRNGGMLMHSHHSSIFINYTIQEGSSETNLHNLPIMHRPLPIPAPTTSPMGSYKKKKSMPPSQAMMLPPPPPNGDCTISCTEPLTYTPPGMPCGCVWPIQVKISLNVAVYTFFPLVSELAEEIADSISLNHSQVRIMGADAASQQLEKTTVLINLVPRRSRFDHNTAFFIYQKFWRRKVSIKASLFGRYQVLDVKYPGLPPSPPSAPLGTSSINDGLNTSNINAGNAIKPLGVDVPRRRKEGLGRNMIVVITISSFTAFVMCVGLAWLCLLRCRVPAHHPAHIPHNLIASPAKPPGTDGSRMAGSELGSSSMPLNDDPMTYIGAAKHFTLKDMENATDNFDSARILGEGGFGIVYSGRLDDGREVAVKVLKRHNQHGIQEFLAEVEMLSRLHHRNLVKLIGICTEDRNRCLVYELVPNGSVESHLHGIDKLISPLDWDARLKVALGAARGLAYLHEDSNPRVIHRDFKASNILLECDFTPKVSDFGLARTALEEGNKHISTHVMGTFGLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEKLTDQFHEVTAETNL 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6125047 6130485 + Cp4.1LG12g08850.1 Cpe12g00619 478616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00619 656 Pfam Protein tyrosine and serine/threonine kinase 439 593 IPR001245 GO:0004672|GO:0006468
Cpe12g00619 656 PANTHER OS01G0750732 PROTEIN 132 605 - -
Cpe12g00619 656 Gene3D Transferase(Phosphotransferase) domain 1 512 607 - -
Cpe12g00619 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Cpe12g00619 656 PANTHER OS01G0750732 PROTEIN 132 605 - -
Cpe12g00619 656 ProSiteProfiles Protein kinase domain profile. 436 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00619 656 PANTHER OS01G0750732 PROTEIN 606 644 - -
Cpe12g00619 656 Gene3D Phosphorylase Kinase; domain 1 407 511 - -
Cpe12g00619 656 SUPERFAMILY Protein kinase-like (PK-like) 410 631 IPR011009 -
Cpe12g00619 656 PANTHER OS01G0750732 PROTEIN 606 644 - -
Cpe12g00619 656 ProSitePatterns Protein kinases ATP-binding region signature. 442 464 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00619 Cpe-Chr12:6125047 Cpe15g00113 Cpe-Chr15:836357 2.92E-102 dispersed
Cpe12g00619 Cpe-Chr12:6125047 Cpe17g00482 Cpe-Chr17:3577916 6.64E-15 wgd
Cpe12g00619 Cpe-Chr12:6125047 Cpe18g00357 Cpe-Chr18:4971009 2.96E-11 wgd
Cpe12g00619 Cpe-Chr12:6125047 Cpe04g01053 Cpe-Chr4:9286957 4.88E-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62759 PF07714 PK_Tyr_Ser-Thr 8.80E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00619 - - csv:101219484 878.241