Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00626 | AGAACCACACACAGAAAAGCCTGGCAGGCAGGGCGGCAGAGCAAATCTTTGTCCAAAATGGACAGTTTCTGGGATGTTTTGGTACTGACAGCCATTTTTTTGACCATCATTCTTCTCTATAGGAACTGCTTTAGCCTTCTCAGATCAAAGCTCTGCAGCCACCTCCCTTTGGGTTCTCTTGGCTGGCCTTTCATTGGTGAAACGCTCGAGTTCATCGCTTGCGCTTATTCGGACCGCCCCGAAGCCTTCATGGACAAGCGTCGTCGCCTGTATGGGAAGGTGTTCAAGTCACATGTTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTTAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTGTTATCCCAAATCTTTGACGGAATTGATGGGGAAATCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGGATTCATGGTCTTGTAGGAGCTTTCTTCAAGTCTTCATATCTCAAAGCTCAAATAACTAAGGATATGGAGTGTTATGTCAAATTAGCTATGGCGAATTGGAGTGAGAACAGTCCTGTTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGTTTGTCAAGCAACAGTTCCAAGAATTCATCGCTGGGCTTATGGCTTTGCCAGTGAACATACCAGGCAGCAGGCTTTACCAATCGTTGCAGGCAAGTTGGATAGTAAAAGCTTTACTATCTTCCTTCACTATCACCATTTTCCTGATGGAGCTTCCTTTTATGCTTGAATTACAGGCCAAAAGGGCCATGGTTAAACTAGTTAAGAAGATCATACAAGAAAGAAGAAGCTGTGGAAGTTCCCCAGTGGCTGTCCCACAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAGTGACCTACTAACAGATGATCTTATAGCAGAGAACATGATTGATATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTGATGACTCTTGCAGTAAAGTACCTCTCGGATTGCCCCGAGGCACTTCAACAGTTAACGGAGGAAAACTTGAAGATGAAAAGGCTGAAAGAGCAGGCAGGAGAGGCATTGCATTGGAGCGATTACCTATCAATGCCATTTACACAGAATGTGATCACAGAGACATTAAGGATGGGAAACATCATAATTGGTGTCATGAGGAAGGCCATGAAAGACATGAACATAAAAGGATATCTAATACCCAAAGGCTGGTCGGTGCTTACCTACTTTAGATCCGTTCATCTTGATGACAGTCACTATCACTGCCCTTACAAGTTCAATCCATGGAGATGGGTAGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAACAGGATGCCAGTTTGGGTGAAGCAAAGAAAGGACCCATGA | 1443 | 42.97 | RTTHRKAWQAGRQSKSLSKMDSFWDVLVLTAIFLTIILLYRNCFSLLRSKLCSHLPLGSLGWPFIGETLEFIACAYSDRPEAFMDKRRRLYGKVFKSHVFGSPTIVSTDAEVSKFILQSDAKAFVPCYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSYLKAQITKDMECYVKLAMANWSENSPVYLQDETKNISFQVLVKILISLNPGQRMEFVKQQFQEFIAGLMALPVNIPGSRLYQSLQASWIVKALLSSFTITIFLMELPFMLELQAKRAMVKLVKKIIQERRSCGSSPVAVPQDVMEVLLKDESDLLTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPEALQQLTEENLKMKRLKEQAGEALHWSDYLSMPFTQNVITETLRMGNIIIGVMRKAMKDMNIKGYLIPKGWSVLTYFRSVHLDDSHYHCPYKFNPWRWVAEEDRIINFPTVRMKNRMPVWVKQRKDP | 480 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6167313 | 6172035 | + | Cp4.1LG12g08830.1 | Cpe12g00626 | 478623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00626 | 480 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 36 | 455 | - | - | |
Cpe12g00626 | 480 | SUPERFAMILY | Cytochrome P450 | 55 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cpe12g00626 | 480 | PANTHER | CYTOCHROME P450 26 | 36 | 455 | - | - | |
Cpe12g00626 | 480 | Pfam | Cytochrome P450 | 56 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cpe12g00626 | 480 | PRINTS | E-class P450 group IV signature | 385 | 401 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cpe12g00626 | 480 | PRINTS | E-class P450 group IV signature | 434 | 452 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cpe12g00626 | 480 | PRINTS | E-class P450 group IV signature | 55 | 72 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cpe12g00626 | 480 | Coils | Coil | 352 | 376 | - | - | |
Cpe12g00626 | 480 | Gene3D | Cytochrome P450 | 48 | 466 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01044 | Cpe-Chr1:6174460 | Cpe12g00626 | Cpe-Chr12:6167313 | 6.17E-96 | dispersed | |
Cpe12g00626 | Cpe-Chr12:6167313 | Cpe14g00833 | Cpe-Chr14:6767269 | 1.75E-70 | dispersed | |
Cpe19g00830 | Cpe-Chr19:6188942 | Cpe12g00626 | Cpe-Chr12:6167313 | 1.65E-116 | transposed | |
Cpe12g00626 | Cpe-Chr12:6167313 | Cpe03g01072 | Cpe-Chr3:8866961 | 1.52E-38 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00626 | K12638 | - | csv:101217830 | 718.383 |