Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00626 AGAACCACACACAGAAAAGCCTGGCAGGCAGGGCGGCAGAGCAAATCTTTGTCCAAAATGGACAGTTTCTGGGATGTTTTGGTACTGACAGCCATTTTTTTGACCATCATTCTTCTCTATAGGAACTGCTTTAGCCTTCTCAGATCAAAGCTCTGCAGCCACCTCCCTTTGGGTTCTCTTGGCTGGCCTTTCATTGGTGAAACGCTCGAGTTCATCGCTTGCGCTTATTCGGACCGCCCCGAAGCCTTCATGGACAAGCGTCGTCGCCTGTATGGGAAGGTGTTCAAGTCACATGTTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTTAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTGTTATCCCAAATCTTTGACGGAATTGATGGGGAAATCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGGATTCATGGTCTTGTAGGAGCTTTCTTCAAGTCTTCATATCTCAAAGCTCAAATAACTAAGGATATGGAGTGTTATGTCAAATTAGCTATGGCGAATTGGAGTGAGAACAGTCCTGTTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGTTTGTCAAGCAACAGTTCCAAGAATTCATCGCTGGGCTTATGGCTTTGCCAGTGAACATACCAGGCAGCAGGCTTTACCAATCGTTGCAGGCAAGTTGGATAGTAAAAGCTTTACTATCTTCCTTCACTATCACCATTTTCCTGATGGAGCTTCCTTTTATGCTTGAATTACAGGCCAAAAGGGCCATGGTTAAACTAGTTAAGAAGATCATACAAGAAAGAAGAAGCTGTGGAAGTTCCCCAGTGGCTGTCCCACAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAGTGACCTACTAACAGATGATCTTATAGCAGAGAACATGATTGATATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTGATGACTCTTGCAGTAAAGTACCTCTCGGATTGCCCCGAGGCACTTCAACAGTTAACGGAGGAAAACTTGAAGATGAAAAGGCTGAAAGAGCAGGCAGGAGAGGCATTGCATTGGAGCGATTACCTATCAATGCCATTTACACAGAATGTGATCACAGAGACATTAAGGATGGGAAACATCATAATTGGTGTCATGAGGAAGGCCATGAAAGACATGAACATAAAAGGATATCTAATACCCAAAGGCTGGTCGGTGCTTACCTACTTTAGATCCGTTCATCTTGATGACAGTCACTATCACTGCCCTTACAAGTTCAATCCATGGAGATGGGTAGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAACAGGATGCCAGTTTGGGTGAAGCAAAGAAAGGACCCATGA 1443 42.97 RTTHRKAWQAGRQSKSLSKMDSFWDVLVLTAIFLTIILLYRNCFSLLRSKLCSHLPLGSLGWPFIGETLEFIACAYSDRPEAFMDKRRRLYGKVFKSHVFGSPTIVSTDAEVSKFILQSDAKAFVPCYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSYLKAQITKDMECYVKLAMANWSENSPVYLQDETKNISFQVLVKILISLNPGQRMEFVKQQFQEFIAGLMALPVNIPGSRLYQSLQASWIVKALLSSFTITIFLMELPFMLELQAKRAMVKLVKKIIQERRSCGSSPVAVPQDVMEVLLKDESDLLTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPEALQQLTEENLKMKRLKEQAGEALHWSDYLSMPFTQNVITETLRMGNIIIGVMRKAMKDMNIKGYLIPKGWSVLTYFRSVHLDDSHYHCPYKFNPWRWVAEEDRIINFPTVRMKNRMPVWVKQRKDP 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6167313 6172035 + Cp4.1LG12g08830.1 Cpe12g00626 478623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00626 480 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 36 455 - -
Cpe12g00626 480 SUPERFAMILY Cytochrome P450 55 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00626 480 PANTHER CYTOCHROME P450 26 36 455 - -
Cpe12g00626 480 Pfam Cytochrome P450 56 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00626 480 PRINTS E-class P450 group IV signature 385 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00626 480 PRINTS E-class P450 group IV signature 434 452 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00626 480 PRINTS E-class P450 group IV signature 55 72 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe12g00626 480 Coils Coil 352 376 - -
Cpe12g00626 480 Gene3D Cytochrome P450 48 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01044 Cpe-Chr1:6174460 Cpe12g00626 Cpe-Chr12:6167313 6.17E-96 dispersed
Cpe12g00626 Cpe-Chr12:6167313 Cpe14g00833 Cpe-Chr14:6767269 1.75E-70 dispersed
Cpe19g00830 Cpe-Chr19:6188942 Cpe12g00626 Cpe-Chr12:6167313 1.65E-116 transposed
Cpe12g00626 Cpe-Chr12:6167313 Cpe03g01072 Cpe-Chr3:8866961 1.52E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00626 K12638 - csv:101217830 718.383