Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00690 ATGAACTCCGACAACAATCGGGCTGCTCTTGTAACGGATTTCTGGCCGGAGTTCATTGCAAGCAGTTGGGGTAAAGAATTTGTTGCCGGCGGGTTCGGTGGCGTCGCCGGCGTTATCTCCGGCTACCCACTTGATACTCTTCGTATTAGGCAACAGCAATCCGTTTCTGGTTCTGCTTTCAAAATCTTTCGTAATATCATTGCTCATGATGGCCCCGCCGGTCTTTATAGAGGCATGTCTGCGCCGTTCGCCTCTATCACTTTTCAGAACGCGGCCGTGTTTCAAATCTACGCGATTCTTTCTCGAGCATTCACCTCCTCGTCGGCTCAATCCAACGGCGACCCACCAAGCTACAAGGCAGTAGCAATGGGAGGATTTGGCACCGGAGCACTACAGAGCTTCTTCCTAACGCCGGTGGAGCTGGTGAAGATCCGCCTACAATTACAGACATCAACCCAACAACCAATTTCTTCTTCATCATCATCATCATCTCACAAAGGCCCATTAAGCGTCGCCAAAAGCATCTACAAAACAGAGGGATTCAGAGGCATTTACAGAGGACTTACCATAACCATGCTCCGAGACGCCCCTGCCCATGCCGTCTATTTCTGGACCTATGAGTGCATGAGAGAGCAGTTTCAACCCGGCTGCCGGAGCTCCGGCGAAGAGAGATTCAGCACGGCGTTGGTCGCCGGAGGCCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCGTTGGATGTGTTGAAGACAAGAATTCAAGCTCCGACACAAAGGTTGTCGCCGAGGTATAAGGGAATTGTGGATTGTGTTAGCAAGAGTGTTAGGGAAGAGGGTTATAGAGTGCTGTGGCGAGGCCTGGAGACGGCTGTTGCTAGAGCTTTTGTGGTGAATGGGGCCATTTTTAGTGCTTATGGGTTAACTTTGAGGTGTTTATTTAGTAATGGAAGCAATTAG 957 50.47 MNSDNNRAALVTDFWPEFIASSWGKEFVAGGFGGVAGVISGYPLDTLRIRQQQSVSGSAFKIFRNIIAHDGPAGLYRGMSAPFASITFQNAAVFQIYAILSRAFTSSSAQSNGDPPSYKAVAMGGFGTGALQSFFLTPVELVKIRLQLQTSTQQPISSSSSSSSHKGPLSVAKSIYKTEGFRGIYRGLTITMLRDAPAHAVYFWTYECMREQFQPGCRSSGEERFSTALVAGGLAGVASWVFCYPLDVLKTRIQAPTQRLSPRYKGIVDCVSKSVREEGYRVLWRGLETAVARAFVVNGAIFSAYGLTLRCLFSNGSN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6562691 6564459 - Cp4.1LG12g08070.1 Cpe12g00690 478687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00690 318 Gene3D Mitochondrial carrier domain 25 316 IPR023395 -
Cpe12g00690 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 311 IPR018108 -
Cpe12g00690 318 PRINTS Mitochondrial carrier protein signature 26 39 IPR002067 GO:0055085
Cpe12g00690 318 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085
Cpe12g00690 318 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Cpe12g00690 318 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Cpe12g00690 318 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 314 - -
Cpe12g00690 318 SUPERFAMILY Mitochondrial carrier 22 305 IPR023395 -
Cpe12g00690 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 212 IPR018108 -
Cpe12g00690 318 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 13 314 - -
Cpe12g00690 318 Pfam Mitochondrial carrier protein 224 314 IPR018108 -
Cpe12g00690 318 Pfam Mitochondrial carrier protein 123 214 IPR018108 -
Cpe12g00690 318 Pfam Mitochondrial carrier protein 22 106 IPR018108 -
Cpe12g00690 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 103 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01678 Cpe12g00690 CCT
Cpe03g01111 Cpe12g00690 CCT
Cpe12g00690 Cpe17g00563 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00181 Cpe-Chr5:952949 Cpe12g00690 Cpe-Chr12:6562691 1.55E-44 dispersed
Cpe12g00690 Cpe-Chr12:6562691 Cpe14g00957 Cpe-Chr14:8076058 2.82E-06 dispersed
Cpe12g00690 Cpe-Chr12:6562691 Cpe17g00563 Cpe-Chr17:4619591 4.76E-163 wgd
Cpe12g00690 Cpe-Chr12:6562691 Cpe02g01678 Cpe-Chr2:13881484 1.29E-142 wgd
Cpe12g00690 Cpe-Chr12:6562691 Cpe03g01111 Cpe-Chr3:9141112 1.91E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00690 K15109 - csv:101222165 476.092