Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00690 | ATGAACTCCGACAACAATCGGGCTGCTCTTGTAACGGATTTCTGGCCGGAGTTCATTGCAAGCAGTTGGGGTAAAGAATTTGTTGCCGGCGGGTTCGGTGGCGTCGCCGGCGTTATCTCCGGCTACCCACTTGATACTCTTCGTATTAGGCAACAGCAATCCGTTTCTGGTTCTGCTTTCAAAATCTTTCGTAATATCATTGCTCATGATGGCCCCGCCGGTCTTTATAGAGGCATGTCTGCGCCGTTCGCCTCTATCACTTTTCAGAACGCGGCCGTGTTTCAAATCTACGCGATTCTTTCTCGAGCATTCACCTCCTCGTCGGCTCAATCCAACGGCGACCCACCAAGCTACAAGGCAGTAGCAATGGGAGGATTTGGCACCGGAGCACTACAGAGCTTCTTCCTAACGCCGGTGGAGCTGGTGAAGATCCGCCTACAATTACAGACATCAACCCAACAACCAATTTCTTCTTCATCATCATCATCATCTCACAAAGGCCCATTAAGCGTCGCCAAAAGCATCTACAAAACAGAGGGATTCAGAGGCATTTACAGAGGACTTACCATAACCATGCTCCGAGACGCCCCTGCCCATGCCGTCTATTTCTGGACCTATGAGTGCATGAGAGAGCAGTTTCAACCCGGCTGCCGGAGCTCCGGCGAAGAGAGATTCAGCACGGCGTTGGTCGCCGGAGGCCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCGTTGGATGTGTTGAAGACAAGAATTCAAGCTCCGACACAAAGGTTGTCGCCGAGGTATAAGGGAATTGTGGATTGTGTTAGCAAGAGTGTTAGGGAAGAGGGTTATAGAGTGCTGTGGCGAGGCCTGGAGACGGCTGTTGCTAGAGCTTTTGTGGTGAATGGGGCCATTTTTAGTGCTTATGGGTTAACTTTGAGGTGTTTATTTAGTAATGGAAGCAATTAG | 957 | 50.47 | MNSDNNRAALVTDFWPEFIASSWGKEFVAGGFGGVAGVISGYPLDTLRIRQQQSVSGSAFKIFRNIIAHDGPAGLYRGMSAPFASITFQNAAVFQIYAILSRAFTSSSAQSNGDPPSYKAVAMGGFGTGALQSFFLTPVELVKIRLQLQTSTQQPISSSSSSSSHKGPLSVAKSIYKTEGFRGIYRGLTITMLRDAPAHAVYFWTYECMREQFQPGCRSSGEERFSTALVAGGLAGVASWVFCYPLDVLKTRIQAPTQRLSPRYKGIVDCVSKSVREEGYRVLWRGLETAVARAFVVNGAIFSAYGLTLRCLFSNGSN | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6562691 | 6564459 | - | Cp4.1LG12g08070.1 | Cpe12g00690 | 478687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00690 | 318 | Gene3D | Mitochondrial carrier domain | 25 | 316 | IPR023395 | - | |
Cpe12g00690 | 318 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 223 | 311 | IPR018108 | - | |
Cpe12g00690 | 318 | PRINTS | Mitochondrial carrier protein signature | 26 | 39 | IPR002067 | GO:0055085 | |
Cpe12g00690 | 318 | PRINTS | Mitochondrial carrier protein signature | 131 | 149 | IPR002067 | GO:0055085 | |
Cpe12g00690 | 318 | PRINTS | Mitochondrial carrier protein signature | 185 | 203 | IPR002067 | GO:0055085 | |
Cpe12g00690 | 318 | PRINTS | Mitochondrial carrier protein signature | 232 | 254 | IPR002067 | GO:0055085 | |
Cpe12g00690 | 318 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 13 | 314 | - | - | |
Cpe12g00690 | 318 | SUPERFAMILY | Mitochondrial carrier | 22 | 305 | IPR023395 | - | |
Cpe12g00690 | 318 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 116 | 212 | IPR018108 | - | |
Cpe12g00690 | 318 | PANTHER | CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN | 13 | 314 | - | - | |
Cpe12g00690 | 318 | Pfam | Mitochondrial carrier protein | 224 | 314 | IPR018108 | - | |
Cpe12g00690 | 318 | Pfam | Mitochondrial carrier protein | 123 | 214 | IPR018108 | - | |
Cpe12g00690 | 318 | Pfam | Mitochondrial carrier protein | 22 | 106 | IPR018108 | - | |
Cpe12g00690 | 318 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 24 | 103 | IPR018108 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g01678 | Cpe12g00690 | CCT | |
Cpe03g01111 | Cpe12g00690 | CCT | |
Cpe12g00690 | Cpe17g00563 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00181 | Cpe-Chr5:952949 | Cpe12g00690 | Cpe-Chr12:6562691 | 1.55E-44 | dispersed | |
Cpe12g00690 | Cpe-Chr12:6562691 | Cpe14g00957 | Cpe-Chr14:8076058 | 2.82E-06 | dispersed | |
Cpe12g00690 | Cpe-Chr12:6562691 | Cpe17g00563 | Cpe-Chr17:4619591 | 4.76E-163 | wgd | |
Cpe12g00690 | Cpe-Chr12:6562691 | Cpe02g01678 | Cpe-Chr2:13881484 | 1.29E-142 | wgd | |
Cpe12g00690 | Cpe-Chr12:6562691 | Cpe03g01111 | Cpe-Chr3:9141112 | 1.91E-144 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00690 | K15109 | - | csv:101222165 | 476.092 |