Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00691 ATGATATGTCAACAAAGTGACCTGCTTTTCGACGAGTTTTCCCACTCCCAGTCGACACCGCACAATGCACTGACACAAGGCCAAAAGCTAACAATTGGGTCTCAGTTAATTTCAGCCACCGGCAGCTTTGTGCTTGGATTTAATCCCACTTATTTGGGGATCTCCTACAACACTAAGCACCAGAAGCCAGTATGGATAGCCAACCGAGACTCTCCATTTCCCAACAATGATGCGTCGATCAGCCTCACCATCGACGCCAACGGCAGCTTGAAAATAGTAGATGGCCATGGCTATTCCTTTTCACTCTATGATGTCGAACAGCCAATCAGTAGCAGCGCCGTGTTGCAAGACGATGGTAACCTTGTACTGCAAGAGCTGAACCAAGATGGATTGGTGAAACGGGTGGTGTGGCAGAGCTTTGATCATCCAACGGACACTCTTCTTCCAGGAATGAAACTTGGAATCAATCATAAAACTGGATATGCTTGGTCTTTAACATCTTGGGGTAGCAATGAATCTCCTACGTCGGGAGCTTTCGCTCTGGCAATGAATCCAAACAATACTAATCAAATACAGATATTGTTCAGGGGTGGCGTGTATTGGAGCAGCGGGGAGTGGAAAGATGGTTGGTTTGAAAACCTATCGGAACTCGACTACTATAAAGAAATCTATTTCAACCGAGTTTCGAATGAGAATGAAACGTATTTCATTTACTATGTCCCCAAATTCGATCGAACGCCCAGCTTCAATCAACTATCAGGAGTGGTTCTACCCAAGTTGAGATTAGCAGATGGTGCCACTTTGGTGATGAACAATCAAATTTCATACGAAGTTTGCACGCTCTTCAATATGGAAGAAGGGTGCGTGTGGAGAAATCAGCAGAAAATGGCAGAGTGTGGGCGTAGTTCCTTTTGGTGGATCTCTGGATACATGGAGGGAGAGGGTTCTAAGTACAATGGAAGTGAGAACCTATCGATGTTTGAATGCGAAAATATTTGCCTTCTTGATTGTGATTGCGTAGCTTATGGTTATGCGAACCAAGATGGAAGCGGCTGTGAGATTTGGAAGTCAGGAGCAAAGCATACCTGCAATGTTTCTCCTACTCTGTTTTATGTCCTACGTCAAATGGAGAACACAAATATTGAAAGAAAAGTGAAGAAAGGTATCGTTCGCGGGATAGGTGCTATATCCGAAGACTCGGAGAAGAAGTTAATATTAGACTGGGACAAGCGTTTTCACATAATCCAAGGGATAGTTCAAGGACTACTCTACCTTCACTACTATTCAAGAGTACGAATAATTCATCGAGATTTGAAAGTTAGCAATATCTTACTAGACGATGAGATGAATGCAAAAATATCAGATTTTGGTATGGCTAGGGTGTTTAAACCATCCGAGCATGAAGCAAACACAAGTCGGGTGGTTGGAACATATGGGTATATATCACCAGAATATGCAATGGAGGGCATTTTCTCGATAAAGTCAGACGTGTACAGTTTTGGAATATTATTGTTGGAGATCATAACGGGCAAAAAGAACTACAACAATTATGGCACAGAACGGCCATTGAATCTCATAGGATATGCGTGGGAGCTGTGGGTGAATGGGAGAGGAGAAGAGCTGATTGATTCGGATTTTTGCAACTCTGATCAGAAACCAAAAGCTCTAAGATGCATCCATGTGGGTCTTTTGTGCGTACAACAAGTACCGGCAGACAGGCCGACGATGCTGGATGTTTATCTAATGATTAACAATGATTCTACTCAAGTTCTACCTCCCAAGCAGCCTGCATTCTTCATTTCTCAAAACCCAAACTCGTCGGAGCTTGAACTGGAGGTGGTCGACAGTGGGCGGCTCATACGGCCTGCACAGCCACCACAGGAAATTTGTTCATTGAGTACTATGTCAGTCTCGGTGATGGTGGCCAGGGCCGCACCAACAAACACATCAGTCTCCAACCCAAAAGAGCTGAGCAAGCTTGAGAACAATGAGAAG 1995 44.16 MICQQSDLLFDEFSHSQSTPHNALTQGQKLTIGSQLISATGSFVLGFNPTYLGISYNTKHQKPVWIANRDSPFPNNDASISLTIDANGSLKIVDGHGYSFSLYDVEQPISSSAVLQDDGNLVLQELNQDGLVKRVVWQSFDHPTDTLLPGMKLGINHKTGYAWSLTSWGSNESPTSGAFALAMNPNNTNQIQILFRGGVYWSSGEWKDGWFENLSELDYYKEIYFNRVSNENETYFIYYVPKFDRTPSFNQLSGVVLPKLRLADGATLVMNNQISYEVCTLFNMEEGCVWRNQQKMAECGRSSFWWISGYMEGEGSKYNGSENLSMFECENICLLDCDCVAYGYANQDGSGCEIWKSGAKHTCNVSPTLFYVLRQMENTNIERKVKKGIVRGIGAISEDSEKKLILDWDKRFHIIQGIVQGLLYLHYYSRVRIIHRDLKVSNILLDDEMNAKISDFGMARVFKPSEHEANTSRVVGTYGYISPEYAMEGIFSIKSDVYSFGILLLEIITGKKNYNNYGTERPLNLIGYAWELWVNGRGEELIDSDFCNSDQKPKALRCIHVGLLCVQQVPADRPTMLDVYLMINNDSTQVLPPKQPAFFISQNPNSSELELEVVDSGRLIRPAQPPQEICSLSTMSVSVMVARAAPTNTSVSNPKELSKLENNEK 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6565514 6571540 + Cp4.1LG12g08210.1 Cpe12g00691 478688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00691 665 SUPERFAMILY Protein kinase-like (PK-like) 401 604 IPR011009 -
Cpe12g00691 665 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 172 IPR036426 -
Cpe12g00691 665 Pfam Protein kinase domain 404 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00691 665 Pfam PAN-like domain 321 357 IPR003609 -
Cpe12g00691 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 371 - -
Cpe12g00691 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 405 616 - -
Cpe12g00691 665 SMART serkin_6 355 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00691 665 SMART blect_4 21 143 IPR001480 -
Cpe12g00691 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Cpe12g00691 665 Pfam D-mannose binding lectin 64 168 IPR001480 -
Cpe12g00691 665 Gene3D Transferase(Phosphotransferase) domain 1 395 592 - -
Cpe12g00691 665 ProSiteProfiles Bulb-type lectin domain profile. 21 136 IPR001480 -
Cpe12g00691 665 CDD B_lectin 30 143 IPR001480 -
Cpe12g00691 665 ProSiteProfiles PAN/Apple domain profile. 299 363 IPR003609 -
Cpe12g00691 665 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 405 616 - -
Cpe12g00691 665 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 63 371 - -
Cpe12g00691 665 Gene3D - 17 141 IPR036426 -
Cpe12g00691 665 ProSiteProfiles Protein kinase domain profile. 275 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00691 Cpe-Chr12:6565514 Cpe17g00589 Cpe-Chr17:4880840 2.04E-96 dispersed
Cpe12g00691 Cpe-Chr12:6565514 Cpe20g00398 Cpe-Chr20:2246374 2.26E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62763 PF00069 Pkinase 4.20E-26 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00691 - - csv:105436284 758.444