Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00701 ATGGGAATCGGTTCCAATCGAGTTGAAAACTTCGAATGTCGTGAAACGGTGTTGACGATTCCGGCGGAGGCAATGCCGCCGCTGCCGCCGCAACAGGAGGAGGAGGTTCACAAAGTTTGCTTGCCGCCGAAGCAGACTACCTTTCAGAAACTCAAACACAAGCTATCGGAGGTGTTCTTCCCCGATGATCCGTTCTACAAATTCCAGAATCAATCGTGGTTAAGAAAAGTGATTTTCGGCCTTCAATCTCTGTTCCCTGTGTTTGAGTGGGGCCCTGATTATACCCTAGCTCTTTTCAAATCTGATATCGTTTCTGGTCTCACAATCGCTAGCCTCGCTATTCCTCAGGGAATAAGTTATGCGAAACTAGCAAATTTGCCTCCAATCATCGGATTATATTCAAGTTTTGTGCCTCCGCTGATATATTCTATCCTTGGGAGCTCTAGACATCTTGCTGTTGGCCCAGTTTCAATTGCCTCTTTGGTCATGGGATCGATGATTACTGAGGCAGTCTCTTATAACGAACAGCCTACTCTCTATCTTAAGTTAGCTTTCACTGCTACCTTCTTTGCTGGTGTGTTCCAAGCATCTTTAGGCTTGTTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCTACTTTAGTTGGCTTTATGGCTGGTGCAGCAGTCATTGTGTCATTGCAACAACTCAAAGGGTTGCTTGGAATTTCCCATTTCACCTCCAAAATGCAATTGATTCCTGTCATGTCTTCTGTTTTTCACCGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTTCATTTTCCTACTCATTCTTCTAGGAACAAGGCATATCAGCATCAAGAAACCAAAGCTTTTCTGGATATCAGCAGCTGCTCCACTGACATCAGTTATTTTGTCCACTCTTTTGGTCTTCCTTCTCAGAGAAAAAGCTCCAGGAATCTCAGTGATTGGTCATTTGCCAAAGGGTATCAATCCTCCATCACTGAACATGCTGTACTTTACTGGTCCTCAATTGGCACTTGCCATTAAAACTGGCATTATAAGTGGAATTCTCTCGCTCACTGAAGGAATTGCCGTAGGAAGAACGTTTGCTGGTTTGAAAAACTATCAAGTAGATGGGAACAAAGAAATGATGGCCATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCGTGCTATGTCACTACAGGATCGTTTTCTCGGTCCGCTGTGAATTATAATGCCGGGGCACAAACAGCAATTTCAAATGTTGTGATGTCTGCAGCTGTGCTCATAACATTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGACTAATTGATTACCAAGCAGCCTGTAGGTTGTGGAAAGTTGACAAGCTCGATTTTGTAGCTTGTGTTTGTTCTTTCTTCGGCATTCTTTTCATCTCGGTTCCAATGGGTCTCGCCATTGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACCAGACCAAACACCATAGTTTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACCTCGACCGATACCGTGATGCCTCGAGGGTGCCTTCGTTTCTCATTCTTGCCGTTGAATCTCCAATCTATTTTGCAAATTCAACATACCTACAAGAAAGGATTCTTAGGTGGGTTAGGGAAGAAGAAGAGCGGGTAAAAGCGACGAATGATAGCCCATTGAAATGTGTAATCCTAGACATGACAGCTGTAACATCCATAGACACAAGTGGTATAGAAACAGTATGCGAGCTTAGAAAGATGTTGATGCAAAAATCACTGCAGTTTGTGCTTGCAAATCCGGGTGGAAACACGATGGAAAAACTGCATAAATCAGACGCCTTGGAACGGTTCGAGTTTAACGGTCTCTACCTCTCGGTTGGAGAAGCTGTGAAGGACATTTCTTCTCTATGGAAGAGGCTGCCATAA 1986 43.35 MGIGSNRVENFECRETVLTIPAEAMPPLPPQQEEEVHKVCLPPKQTTFQKLKHKLSEVFFPDDPFYKFQNQSWLRKVIFGLQSLFPVFEWGPDYTLALFKSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMITEAVSYNEQPTLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGISHFTSKMQLIPVMSSVFHRKDEWSWQTIVLGFIFLLILLGTRHISIKKPKLFWISAAAPLTSVILSTLLVFLLREKAPGISVIGHLPKGINPPSLNMLYFTGPQLALAIKTGIISGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAISNVVMSAAVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACVCSFFGILFISVPMGLAIAVGVSVFKILLHVTRPNTIVLGNISGTQIFQNLDRYRDASRVPSFLILAVESPIYFANSTYLQERILRWVREEEERVKATNDSPLKCVILDMTAVTSIDTSGIETVCELRKMLMQKSLQFVLANPGGNTMEKLHKSDALERFEFNGLYLSVGEAVKDISSLWKRLP 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6618880 6623552 - Cp4.1LG12g07920.1 Cpe12g00701 478698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00701 661 Gene3D STAS domain 510 654 IPR036513 -
Cpe12g00701 661 PANTHER SULFATE TRANSPORTER 31 659 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g00701 661 Pfam STAS domain 531 649 IPR002645 -
Cpe12g00701 661 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Cpe12g00701 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Cpe12g00701 661 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
Cpe12g00701 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Cpe12g00701 661 TIGRFAM sulP: sulfate permease 86 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g00701 661 PANTHER - 31 659 - -
Cpe12g00701 661 Pfam Sulfate permease family 99 478 IPR011547 GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00701 Cpe17g00570 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00279 Cpe-Chr8:1795968 Cpe12g00701 Cpe-Chr12:6618880 0 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe13g00577 Cpe-Chr13:5683783 0 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe17g00570 Cpe-Chr17:4661197 0 wgd
Cpe12g00701 Cpe-Chr12:6618880 Cpe18g00445 Cpe-Chr18:5470892 0 wgd
Cpe12g00701 Cpe-Chr12:6618880 Cpe04g01145 Cpe-Chr4:9837186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00701 K17471 - csv:101203079 1183.7