Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00709 ATGGAGATCAAAGAAAACAACAGATTTTCAAGTATCTCCTCTCCATTAATGTCATCTTCTTCGATGGCTATCCTCCTGGTTGTTCTATGCTTTGTCTTTAACGACCCGAACGCTGCATTTGCAGTCGGACCGGGCGCTTCCTTCATTCCCAAAGATAACTTTCTCATTGACTGTGGAGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGACTGTTCCAAACTGATGAACAATCCGAACAGTACTTAGAGGCCAACGATCATCTCGTAGCAGCCGCTGCACCGGAGATGAAGGCACCGTCCCCGGTCGATTTAACAGCAAGAATATTCCTCCAAGAAGCTACTTACATTTTTCAAATGGCAGAGCCAGGATGGCATTGGCTACGCCTCCATTTCTTGCCTGTTAAAAGCAATGACTTTGATCTCTTAGAAGCCAAGTTTTCAGTAGTCACTGAAAAATATGTGTTGCTTCATAGCTTCAACATCAATAATGATTCCACATTTGTTCTTAAGGAGTTTCTTCTCAATATCACTGACCCAAAACTGTCAATCACATTCTTCCCATTGAAGAATTCAGCTGCTTTTATCAATGCCATCGAGGTCGTCTCGGCTCCGATGGACTTGATAGCTGACTCGAACATGGAACTGTCTCCAGTCGGGACGATCGAGGGGCTAACGAAATATGCGTTTCAGACATTGTATAGGTTGAACATGGGAGGACCTATAATCACTCCAAGAAATGACACTATTGGGAGGACATGGGAGACAGATGAGATATACAGGACACCAAAAGCAGCTGGTAGGAGTGTCATTGTTGAGACCAAGAGCATTAAATATCAAGATGGGTTGGAAGAAATTGGCATGTTAATAGCTCCTCCAAGTGTGTATGCCAGTGCAGTTCAAATGGGAGAAGCTCATACAAGTGTACCAAATTTTAATGTCACATGGAAATTGGAGGCAGATCCTTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTAAGCAAAGCACTCAATAATCTGTATTTCAATGTTTATGTAAATGGGAAGCCTGCTATAACCAACTTGGATTTGTCACACAAGCTAGGGAGTTTGGCTACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCTTGATGGTAGGGGGATTGACGGTTCAAATTGGTCCGGCGAACGTCGAAACGGGTGATATGAATGCCATTTTGAATGGCTTAGAGGTACTGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGGAGTAGTCGTGGTACGGTGGCTGCTGTTGGGTTTGCGATGATGTTCGGGGCGTTTGTCGGGCTCGGTGCTATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACACTGTTGCCCCCGCGACCGCTGTCGACGCTTCTACAAATGCACCGAACTCGGTCGAGCGCCCTGTCGTGCAGGCAGAACGGAGTAGGCAACCAGTAGAGGTCGAAGACGTCGATGATGACTCGGGAAGTACAATGTTTGCTCATTTCTCTAATCTCAAT 1572 44.91 MEIKENNRFSSISSPLMSSSSMAILLVVLCFVFNDPNAAFAVGPGASFIPKDNFLIDCGANKELGALPDGRLFQTDEQSEQYLEANDHLVAAAAPEMKAPSPVDLTARIFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLEAKFSVVTEKYVLLHSFNINNDSTFVLKEFLLNITDPKLSITFFPLKNSAAFINAIEVVSAPMDLIADSNMELSPVGTIEGLTKYAFQTLYRLNMGGPIITPRNDTIGRTWETDEIYRTPKAAGRSVIVETKSIKYQDGLEEIGMLIAPPSVYASAVQMGEAHTSVPNFNVTWKLEADPSFGYLIRFHFCDIVSKALNNLYFNVYVNGKPAITNLDLSHKLGSLATAYYKDVVVNASLMVGGLTVQIGPANVETGDMNAILNGLEVLKISNSVNSLDGEFGVDGKSANGSSRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNTVAPATAVDASTNAPNSVERPVVQAERSRQPVEVEDVDDDSGSTMFAHFSNLN 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6673911 6676531 + Cp4.1LG12g08020.1 Cpe12g00709 478706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00709 524 Pfam Malectin-like domain 56 411 IPR024788 -
Cpe12g00709 524 PANTHER OS07G0166700 PROTEIN 38 482 IPR045272 GO:0004714|GO:0006468
Cpe12g00709 524 MobiDBLite consensus disorder prediction 482 501 - -
Cpe12g00709 524 PANTHER BNAC03G60370D PROTEIN 38 482 - -
Cpe12g00709 524 Gene3D - 53 207 - -
Cpe12g00709 524 Gene3D - 228 414 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00709 Cpe-Chr12:6673911 Cpe16g00577 Cpe-Chr16:6551378 1.03E-80 dispersed
Cpe12g00709 Cpe-Chr12:6673911 Cpe17g00606 Cpe-Chr17:5017980 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00709 - - csv:101220967 823.157