Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00714 | ATGAGAAAAGAAGAAAATCTCATCAGGGAAAATATTGGAGAATTTCCTGGTAGAATTACACGTGCTCGAGCTGCTGCATTTAGTACGTCAGGGCAGCTGCCTCCAAAAGTTCCTGCATATCAACAAGAGAGGCGGGCTGCACGAGCTAATTTGAAAAGAGCTGCTTCTGAAGAAAATAGCTGCCCTTCTATTGCTAAATCATCTCGGCCATGTAAGAGGAGGGCCGTGCTTCAGGATGTCAGCAATATTGGCTGTGAACCTTCGTACTCAAAATGTTCTAATGCAGCTAAAATTGAGACCAATTGTTGCAAGCCAACAATCAGAAACCGTATCAAGAAGTCAAAAGGAGCCTCATCAGTTGGTGTGGCTAACTCCAAGGTTCCTCTTGGTCTTAGAACCAAAGGAGCTTCATCAGTTGGTGTGGCGTACTCCAAGCCTCTTGATCTTAGAACACAAGGTGTACAAGCAAATGTGAGATCAAAAGCTAAGTTGAAAGTTGAGCATTCAAGTAATTCTGAAGACCATGAGGAACATCATCGGGTCGGTGGTATAAAGGAAGAGGTCACAAGTGATTTTCGGGATGATAATTGGAGGTCTCAAAGTCCTTCAGAGTCCCAAAATTTTCAAAATAAAGAGAAAGTGTCGTTTATGGGGACTAGAAGCAACCTGAACATTACAGACATTGATTGTAATGACAGAGATACTCAACTGTGCACTGTCTATGCCAATGATATCCATAACAATTTACGCGTTGCTGAGCTAACCAGAAGACCGCGTCCCAATTTCATGGAAACAGTGCAGACTGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTCGTTGAGGTATCGGAGGAATACAAGTTAGTACCAGATACGCTCTATCTAACTGTATTTTTCATTGATTGGTATCTCTCCCAAAATTACATCGAGAGACAAAAGCTTCAACTGTTGGGTATCTCTTGCATGTTAATCGCCTCGAAGTATGAAGAAATTTGTGCCCCACGTGTTGAAGACTTTTGTTTCATCACTGACAGCACCTACACAAAAGAGGAGGTATTGAATATGGAAGGTCAAGTATTGAAGCATATGGGCTTTCAACTTTCTGCACCAACTGCAAAATCTTTCCTCAGGAGATACGTTCGAGCTGCACAAACGACATATAAGACCCCTAGTCTTGAACTCGAGTGCCTCGCCAACTATCTTGCCGAATTAACACTGGTTGACTACGGTTTCTTGAACTTTCTTCCCTCAGTTATAGCTGCATCAGCTGTATTTCTTTCGAAATGGACGTTGGATCAGTCGAGTCACCCATGGAATTCAACACTGGAATACTATACCTCATATAAAGCATCAGATCTGAAAAAAACTGTTCTTGCTTTACAAGATTTACAGTTGAACACCAATGGTTGTCCTCTTAGCTCGATTCGCGTCAAGTATCGACAAGAAAAGTTCAAAGGCGTTGCAACTTTGTCTTCCCCGAAATTACTCGATACACTATTCTGA | 1512 | 42.13 | MRKEENLIRENIGEFPGRITRARAAAFSTSGQLPPKVPAYQQERRAARANLKRAASEENSCPSIAKSSRPCKRRAVLQDVSNIGCEPSYSKCSNAAKIETNCCKPTIRNRIKKSKGASSVGVANSKVPLGLRTKGASSVGVAYSKPLDLRTQGVQANVRSKAKLKVEHSSNSEDHEEHHRVGGIKEEVTSDFRDDNWRSQSPSESQNFQNKEKVSFMGTRSNLNITDIDCNDRDTQLCTVYANDIHNNLRVAELTRRPRPNFMETVQTDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFIDWYLSQNYIERQKLQLLGISCMLIASKYEEICAPRVEDFCFITDSTYTKEEVLNMEGQVLKHMGFQLSAPTAKSFLRRYVRAAQTTYKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLEYYTSYKASDLKKTVLALQDLQLNTNGCPLSSIRVKYRQEKFKGVATLSSPKLLDTLF | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6723254 | 6729122 | + | Cp4.1LG12g07840.1 | Cpe12g00714 | 478711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00714 | 503 | SMART | Cyclin_C_2 | 373 | 496 | IPR004367 | - | |
Cpe12g00714 | 503 | Coils | Coil | 37 | 57 | - | - | |
Cpe12g00714 | 503 | Pfam | Cyclin, N-terminal domain | 244 | 370 | IPR006671 | - | |
Cpe12g00714 | 503 | Pfam | Cyclin, C-terminal domain | 373 | 495 | IPR004367 | - | |
Cpe12g00714 | 503 | CDD | CYCLIN | 274 | 359 | IPR013763 | - | |
Cpe12g00714 | 503 | MobiDBLite | consensus disorder prediction | 165 | 209 | - | - | |
Cpe12g00714 | 503 | CDD | CYCLIN | 373 | 463 | IPR013763 | - | |
Cpe12g00714 | 503 | SUPERFAMILY | Cyclin-like | 373 | 498 | IPR036915 | - | |
Cpe12g00714 | 503 | SUPERFAMILY | Cyclin-like | 234 | 370 | IPR036915 | - | |
Cpe12g00714 | 503 | PANTHER | CYCLIN-A2-4 | 51 | 503 | - | - | |
Cpe12g00714 | 503 | PANTHER | CYCLINS | 51 | 503 | IPR039361 | - | |
Cpe12g00714 | 503 | PIRSF | Cyclin_A_B_D_E | 35 | 502 | IPR039361 | - | |
Cpe12g00714 | 503 | Gene3D | - | 258 | 371 | - | - | |
Cpe12g00714 | 503 | MobiDBLite | consensus disorder prediction | 165 | 198 | - | - | |
Cpe12g00714 | 503 | SMART | cyclin_7 | 280 | 364 | IPR013763 | - | |
Cpe12g00714 | 503 | SMART | cyclin_7 | 377 | 465 | IPR013763 | - | |
Cpe12g00714 | 503 | Gene3D | - | 244 | 492 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00714 | Cpe17g00601 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02068 | Cpe-Chr1:17525206 | Cpe12g00714 | Cpe-Chr12:6723254 | 1.95E-79 | dispersed | |
Cpe02g00434 | Cpe-Chr2:2437300 | Cpe12g00714 | Cpe-Chr12:6723254 | 9.66E-145 | dispersed | |
Cpe04g00309 | Cpe-Chr4:3874502 | Cpe12g00714 | Cpe-Chr12:6723254 | 1.51E-78 | dispersed | |
Cpe06g00355 | Cpe-Chr6:1977645 | Cpe12g00714 | Cpe-Chr12:6723254 | 8.09E-111 | dispersed | |
Cpe12g00714 | Cpe-Chr12:6723254 | Cpe13g00635 | Cpe-Chr13:6074518 | 3.49E-106 | dispersed | |
Cpe15g00455 | Cpe-Chr15:5624271 | Cpe12g00714 | Cpe-Chr12:6723254 | 5.94E-65 | dispersed | |
Cpe12g00714 | Cpe-Chr12:6723254 | Cpe17g00601 | Cpe-Chr17:4969863 | 0 | wgd | |
Cpe12g00714 | Cpe-Chr12:6723254 | Cpe07g00263 | Cpe-Chr7:1707425 | 3.05E-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00714 | K06627 | - | csv:101222299 | 893.649 |