Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00766 ATGGGAGAGAGATTAGGAGGTTGGGCTATGAATCTTCTCACTATTTTACTACCCATGTGGGTTTCCTCTTCCTTGTTCCCAATAATTGATGCCACTACACACCTCCCTGGGTTTTCAATTTCTAGGACCAGACCCCAATCCATTCCTCTCATTGTGGCCAAAATGGAAGCTCAATCCCCAGGAGCTGCAGATGTTAGAGTAGTTCATCACCAAGATTTGAACAAGAGAATTCTTGTAGCTTTGGTTGTTTCTTCCACACTTCTTGGAGCTATACTGCTGTTCCTTTTGTGTTTTTGGATATATCGTCGAAAAACGTCGAATCTTGATGATGAAAAATGTCGAAAGAATTCGGAGGGTTCGAAAGGGGTGACGTTAAATCCGATCATATCCAGGTTTAACTCACTGAGGTTAGCTAACTTTAAAGGTTCGGTTTCGACGTTCGACTATAAACTGTTGGAAGCTGCTACTGATAGCTTCAGCAAAAACAATGTCTTGGGCCATGGTGGTTCAGGACATGTTTACAAAGCTTGCTTCAATGATAAATTGCTGGCAGCTGTGAAGAGAATCGATAATGGAGGAGCGGATGCTGAAAGAGAATTCGAGAATGAGTTGAGCTGGTTGTGTAAAATTCGACATCAAAATGTAATCAAACTCTTGGGACATTGCATTCATGGCGAAACACGGTTTCTCGTTTACGAGATGATGCATAATGGATCTTTGGAGTCTCAGTTACACGGACCTTCTCGTGGATCGGCTTTAACTTGGCATCTCCGGATGAAGATTGCTGTCGATGTTGCAAGAGGATTGGAATATCTTCACGAGCATCGAAATCCTCCTGTCGTTCATCGGGATTTGAAATCGTCGAATATCCTTCTCGATTCGGACTTTAACGCCAAGCTCTCTGACTTTGGCCTTGTTGTCAACTTGGGAGCTCAAAACAAAAACATAAAGCTCTCGGGAACGTTGGGTTATGTCGCCCCGGAATACCTTTTAGACGGTAAACTAACCGATAAGAGCGATGTGTATGCTTTTGGCGTTGTTCTTCTCGAGCTTCTAACAGGGAAAAAGCCTGTCGAGAAGACGGGACCGACTCATTCCCAATCTCTAGTTTCATGGGCGATCCCGCAGCTCAGCGACAGATCTAAGCTACCGAAAATTGTCGATCCCGTGATAAAGGACACGATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCAGTGTTATGTGTACAATCAGAACCGAGCTATCGACCGTTAGTAACCGACGTTCTACATTCCCTCATCCCTCTCGTACCGGTAGAGCTTGGAGGATCTCTAAGAATTACAGAACCTCTGCATCCAAAAATGCATTCATCGACCCGGTAA 1368 44.3 MGERLGGWAMNLLTILLPMWVSSSLFPIIDATTHLPGFSISRTRPQSIPLIVAKMEAQSPGAADVRVVHHQDLNKRILVALVVSSTLLGAILLFLLCFWIYRRKTSNLDDEKCRKNSEGSKGVTLNPIISRFNSLRLANFKGSVSTFDYKLLEAATDSFSKNNVLGHGGSGHVYKACFNDKLLAAVKRIDNGGADAEREFENELSWLCKIRHQNVIKLLGHCIHGETRFLVYEMMHNGSLESQLHGPSRGSALTWHLRMKIAVDVARGLEYLHEHRNPPVVHRDLKSSNILLDSDFNAKLSDFGLVVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKTGPTHSQSLVSWAIPQLSDRSKLPKIVDPVIKDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLHPKMHSSTR 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6980072 6982951 + Cp4.1LG12g07480.1 Cpe12g00766 478763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00766 455 Pfam Protein kinase domain 160 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00766 455 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Cpe12g00766 455 PANTHER BNAC02G46490D PROTEIN 11 450 - -
Cpe12g00766 455 Gene3D Transferase(Phosphotransferase) domain 1 235 433 - -
Cpe12g00766 455 Gene3D Phosphorylase Kinase; domain 1 124 234 - -
Cpe12g00766 455 SMART serkin_6 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00766 455 ProSiteProfiles Protein kinase domain profile. 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe12g00766 455 CDD STKc_IRAK 165 431 - -
Cpe12g00766 455 SUPERFAMILY Protein kinase-like (PK-like) 135 428 IPR011009 -
Cpe12g00766 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Cpe12g00766 455 PANTHER OS01G0750732 PROTEIN 11 450 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00766 Cpe-Chr12:6980072 Cpe17g00482 Cpe-Chr17:3577916 9.56E-33 dispersed
Cpe11g00309 Cpe-Chr11:1670357 Cpe12g00766 Cpe-Chr12:6980072 2.49E-131 wgd
Cpe12g00766 Cpe-Chr12:6980072 Cpe17g00628 Cpe-Chr17:5144289 0 wgd
Cpe12g00766 Cpe-Chr12:6980072 Cpe07g00310 Cpe-Chr7:2015264 1.22E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62764 PF00069 Pkinase 3.20E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00766 - - bhj:120085274 798.119