Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00773 ATGGAGAAACTTGGAGATTCTTCCTTCTCATTTTCTCTCTGTTTCACCAAACCATTTCCACTTACTCTCTCTCTTTACGGAACTATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTCAATGGCACGAAGAATGTTATAATCGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAGCCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCTGTCGCAGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCACTTGCACATATCCTCGTGTACGAGAACCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCATAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTATTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGAACCATCCATGGCTACTTCTTCTCTTCCCACCAAATCCCTCCCGCCATTTTTGCCGGCATCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACTAAGCCGCCATTCCTAGCCCCACCTGACATTTCTCTCTCCACCTCTTCCTCATCGCCCTGTAAACTTCATATTCCCAGTTGTGCCAAGAAGAATCCCTGGCTCGACCCTTTCGACGATGGCGATGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCACCGGACAACCCGAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTTGCATCTCTAGGTCTTAAACTTCGGGGAGATGTACGGCGGTGCTGCTGCGTGATTTCCGGCGGGGTGTATGAAAATCTACTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGTAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCGGCCGATTACACTGACATGGTTGGATTGCTCAAGCTAGCTGGGTTTGGGCATGCAGCGTTTTTGTTCATGACAACAGCTAGAGACAGAGTTAGCTACATTTACCCTGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTCAAACATTTAAACCAGATAGCTCTAATCTTTCCGAGGGAGGGTTCAATATGTATCATCAAATGGTTGATTGGTTAGGGAGACCATTTCGTAGCGTTCCCAGGCATCTCGTTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGATTGTAAAGGAAAAGTATAATCAAGCAGGTGTTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGGGAAAACGTCGAGGAGGAGGTCGGAGATAACGCGAGCATCGTATTTATCACTACCCCAGGACAGCTACCAACACAGCTGCGATCCAACTCGCCATTGCTCGCGAAAAACCGAGAGAAAGCAAAACTATTTGTTCCGGAAGCCGAAGCAAAGAGATGCATTGCAGTTTCATCGACAACGGGACGACTAATCGACATCGATATGGGCACAGTTAAAAGGGCGATACAGAGCTTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA 2373 49.22 MEKLGDSSFSFSLCFTKPFPLTLSLYGTMPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYETVKNLQEKEPSMATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKLAGFGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKNREKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7020793 7028561 + Cp4.1LG12g07280.1 Cpe12g00773 478770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00773 790 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 488 710 - -
Cpe12g00773 790 Pfam NAD dependent epimerase/dehydratase family 41 272 IPR001509 -
Cpe12g00773 790 CDD FR_SDR_e 41 328 - -
Cpe12g00773 790 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 351 732 IPR044983 GO:0009507|GO:0009773|GO:0010598
Cpe12g00773 790 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 740 788 IPR044983 GO:0009507|GO:0009773|GO:0010598
Cpe12g00773 790 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 344 IPR036291 -
Cpe12g00773 790 Gene3D - 32 357 - -
Cpe12g00773 790 MobiDBLite consensus disorder prediction 425 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00914 Cpe-Chr3:5911448 Cpe12g00773 Cpe-Chr12:7020793 1.99E-171 dispersed
Cpe03g00915 Cpe-Chr3:5924193 Cpe12g00773 Cpe-Chr12:7020793 2.57E-63 dispersed
Cpe12g00773 Cpe-Chr12:7020793 Cpe17g00233 Cpe-Chr17:1513021 1.23E-84 dispersed
Cpe01g00793 Cpe-Chr1:4677585 Cpe12g00773 Cpe-Chr12:7020793 1.44E-69 transposed
Cpe05g00491 Cpe-Chr5:2897595 Cpe12g00773 Cpe-Chr12:7020793 3.40E-97 transposed
Cpe09g00299 Cpe-Chr9:1759595 Cpe12g00773 Cpe-Chr12:7020793 5.83E-47 transposed
Cpe20g00885 Cpe-Chr20:7916839 Cpe12g00773 Cpe-Chr12:7020793 5.08E-84 transposed
Cpe12g00773 Cpe-Chr12:7020793 Cpe02g01619 Cpe-Chr2:13561534 6.75E-148 wgd
Cpe12g00773 Cpe-Chr12:7020793 Cpe03g00913 Cpe-Chr3:5889908 8.32E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00773 - - mcha:111014527 700.664