Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00779 ATGATTATCACGGTGAAGGATTCGACGATGGTGACTCCGGCGGAGGAGACGCCGCGCAGGACTCTCTGGAACTCGAACGTCGATCTGGTGATACCGAGTATACACACGCCGAGCGTCTACTTCTACCGCCCGACCGGCGCCTCCAATTTCTTCGACGGTCAGGTTCTCAAGGAAGGCCTAAGCAAAGCGCTGGTGCCGTTTTATCCAATGGCCGGACGGTTGAGACGCGATGAAGACGGTCGTATCGAGATCTACTGTAATGCTGAAGGTGTGCTTCTTGTCGAGGCCGAAACCACGGCGGTTATCGACGATTTCGGTGATTTCGCCCCGACGTTACAGCTTCGGCAACTTATTCCAGCCGTCGATTACTCTGGCGGAATCGAATCGTATCCTTTGCTGGTGTTACAGGTGACACACTTCAAATGCGGCGGCGTTTCACTGGGCGTTGGAATGCAGCACCATTTAGCGGACGGCTTCGCCGGTCTCCACTTCGTGAATACCTGGTCCGACATGTCGCGTGGCCTCGACCTTAAGCTTCAGCCCTTCATCGACCGGACTCTACTCAGAGCGCGGGACCCACCTCAACCGGCATTTCGTCACGTCGAATACGAACCGGCCCCGCCCATGAAAACTCCGGTCCAGCCCAACTCGGAAGGAACCACCGTCTCTGTATTCAAATTCACCCGCGAGCAGCTGAATCTACTCAAAGCCAAATCCAAAGAAAACGGCAATACTATCAACTACAGTTCATATGAGATGCTTTCCGGCCACGTCTGGCGCTGCACGTGCAAGGCGCGTGACCTTCCCGAGGATCAGGAGACTAAGCTCTACATTGCCACCGACGGCCGTGCCCGGTTGCGCCCGCCGCTTCCCAACGGCTACTTCGGCAATGTTATCTTCACAACTACGCCGCTCGCCGTCGCCGGCGAACTGATGTCGAACCCGACGTGGTTCGCCGCCGGCAAGATCCACGATGCCTTGGTTCGGATGGACAATGATTATTTGAGATCGGCTTTGGACTATCTCGAAATGCAGCCGGACTTATCGGCGTTGGTCCGTGGTGCTCATACTTTCCGTTGCCCCAATTTGGGAATCACAAGCTGGGTTCGGCTGCCTATTCACGACGCCGATTTTGGGTGGGGCCGGCCTATTTTTATGGGCCCCGGCGGAATCGCGTACGAGGGATTGTCGTTTATAATCCCGAGTGCGTCCGACGATGGCAGCTTGTCAGTGGCGATTTCGCTGCAGACTCCACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATCTTTAA 1293 55.45 MIITVKDSTMVTPAEETPRRTLWNSNVDLVIPSIHTPSVYFYRPTGASNFFDGQVLKEGLSKALVPFYPMAGRLRRDEDGRIEIYCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHLADGFAGLHFVNTWSDMSRGLDLKLQPFIDRTLLRARDPPQPAFRHVEYEPAPPMKTPVQPNSEGTTVSVFKFTREQLNLLKAKSKENGNTINYSSYEMLSGHVWRCTCKARDLPEDQETKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAAGKIHDALVRMDNDYLRSALDYLEMQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQTPHMKVFEKLFFDL 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7055464 7058529 + Cp4.1LG12g07260.1 Cpe12g00779 478776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00779 430 Gene3D - 210 430 IPR023213 -
Cpe12g00779 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 429 - -
Cpe12g00779 430 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 429 - -
Cpe12g00779 430 Gene3D - 1 205 IPR023213 -
Cpe12g00779 430 Pfam Transferase family 2 426 - -
Cpe12g00779 430 MobiDBLite consensus disorder prediction 198 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01627 Cpe-Chr4:12601127 Cpe12g00779 Cpe-Chr12:7055464 4.84E-90 dispersed
Cpe08g00195 Cpe-Chr8:1301509 Cpe12g00779 Cpe-Chr12:7055464 9.56E-51 dispersed
Cpe12g00779 Cpe-Chr12:7055464 Cpe19g00203 Cpe-Chr19:1635651 2.40E-76 dispersed
Cpe02g00477 Cpe-Chr2:2707191 Cpe12g00779 Cpe-Chr12:7055464 6.05E-20 transposed
Cpe11g00981 Cpe-Chr11:8309124 Cpe12g00779 Cpe-Chr12:7055464 1.43E-11 transposed
Cpe14g00435 Cpe-Chr14:2739302 Cpe12g00779 Cpe-Chr12:7055464 8.93E-31 transposed
Cpe12g00779 Cpe-Chr12:7055464 Cpe17g00636 Cpe-Chr17:5193780 0 wgd
Cpe12g00779 Cpe-Chr12:7055464 Cpe06g00304 Cpe-Chr6:1683716 2.11E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00779 K13065 - csv:101214857 829.706