Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00790 AACTCCATTGTTGTTGGTCCCAAGTTTGATGATCGAATAGAACAGAAACAGCTCAGAATCAATCATGGTATTTACAAATTCTTCGTCAACATCTGTTTTTCAGCTGAACTTTGGCCAAAATATGGGACTCCTGTGAATATCGTTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGTCAAGTTACAGGAATCAACGGCAAAAACGCCACCATACTCACTACCAATGAAAAATCCATTGTGGCAGAAATTTCGCGTATATATCCGAAAGACACGGAGGCGCCGCCGGCAGGGGTGGACGACATGACGAAATTAGCGTACCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGGTTTGCTCTCAATGAGATTTACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGAGACTGCCACATTTGTATGATATTCACATGATGGAGCAATCGATGATCAACGAGCAAGGAAGTCAGTCGATATTAGTGAGCGGAGAGAGTGGTGCTGGTAAGACGGAGACAACGAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGATCAGACACTGAAGGAAGAACAGTGGAACAACAAGTTCTGGAGTCCAACCCTGTATTGGAAGCATTTGGGAATGCCAAAACTGTTAAAAACAACAACTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGAGCTGCCATTCGTACGTACCTTCTCGAACGGTCTCGTGTTTGCCAAGTCTCGGACCCTGAGAGAAACTACCATTGTTTTTACATGCTTTGCGCTGCACCACCGGAAACGAGAAACGCGATGGATGTGGTCGGAATCAGCGAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCCATACTGCATCTAGGAAACATTGACTTCATGAAAGGGAAGGAATTTGACTCCTCCAAAGTCAAAGACGAGAAGTCAAATTACCATCTTGAAACAGCAGCAGAGCTACTCATGTGTGATGCAAAGGCACTGGAGCATTCGCTCTGCCAACGGGTCATCGTGACTCCTGATGGCAACATTACGAAGCCCTTAGACCCCGATGCAGCGGCCTTGAGTCGTGATGCGTTGGCGAAAACCGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGCTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGTGTCCTTGATATCTATGGGTTTGAAAGCTTCAAGATCAACAGCAGCTCTCATGTTTTCAAGATGGAACAAGAGGAGTACACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTTCTTGATCTTATTGAGAAGGGCACCTCTTCAGTTGTTGTCCTGTCTTGCAGTATGTTTCCAAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACATACAAAGGACATAAGCGATTCAGCAAGCCAAAACTCGCTCGAACCGACTTCACGATCAATCATTATGCCGGAGATGTAGGCTACATATCACGAGTTACATACCAAGCAGATCACTTTCTAGATAAAAATAAGGACTACGTAGTAGCAGAACATCAGGCTCTTCTGGATGCCTCCAAATGCTCTTTTGTTGCTAATCTTTTCCCACCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCATGTTTTCAAGATGGAACAAGAGGAGTACACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTTCTTGATCTTATTGAGAAGTTCATATTTGAATCTAGATTGAAGGGCACCTCTTCAGTTGTTGTCCTGTCTTGCAGTATGTTTCCAAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACATACAAAGGACATAAGCGATTCAGCAAGCCAAAACTCGCTCGAACCGACTTCACGATCAATCATTATGCCGGAGATGTAGGCTACATATCACGAGTTACATACCAAGCAGATCACTTTCTAGATAAAAATAAGGACTACGTAGTAGCAGAACATCAGGCTCTTCTGGATGCCTCCAAATGCTCTTTTCATGTTTTCAAGATGGAACAAGAGGAGTACACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCTGGAGGCATAATCGCCCTGCTTGATGAAGCCTGTATGTTTCCAAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACATACAAAGGACATAAGCGATTCAGCAAGCCAAAACTCGCTCGAACCGACTTCACGATCAATCATTATGCCGGAGATGTAGGCTACATATCACGAGTTACATACCAAGCAGATCACTTTCTAGATAAAAATAAGGACTACGTAGTAGCAGAACATCAGGCTCTTCTGGATGCCTCCAAATGCTCTTTTGTTGCTAATCTTTTCCCACCACTTCCTGAGGAGAGCTCAAAGCAATCCAAATGTGTAAAGCCCAACGCAGTTTTGAAGCCTGGAATCTTTGAGAACTTCAACGTCTTGAACCAGTTGAGATGTGGGGGAGTGCTCGAGGCAATTCGAATAAGCTGTGCAGGATATCCAACCAAAAGAACATTTGACGAGTTCCTCGATCGTTTCGGAATGCTTGCTCCAGATATCTCAGATGGGTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGAGCTTAAAGGGTTATCAGATTGGGAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGATGGATGCACGACGAACCGAAATACTGGCCAATGCTGTCCGACGCATCCAACGGCAAATCCGAACCCATCTAACTCGAAAAGAGTTCATCGCCCTGAGGAAAGCTACAATTCATATGCAGAAGCTTTGGAGAGGGCAGCTTGCTCGTAAGCTGTATGAAGAACTGAGAAGAGAAGCAGCTTCAATCCGTATACAAAAGCATGCTCGAGCTCACGCAGATAGAAAATCTTACAAAAGGTTACTTGAATCAGCTATAGTTATTCAAACTGGTATGCGTGGAATGAGAGCTAGAAATGAGTACAGACACAGAAGAAGAACTAAGGCAGCTATCATTATTCAGACTGAATGGCGAAGGGTATCAGCTATTTCAGCTTACAAACAGCATCGGATTGCAACTCTTGCTCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGATGGAGCTAAGAAAATTAAGGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAGGCTAAGGATAAATTGGAGAAGCAAATGCAAGGGCAGCTGAATGAAGCCAATGCTGCAATCATACGTGAGAGAGAAGCAGCAAAACTGGCTATAGAACAAGCTCCACCAGTCATTAAGGAAGTGCCTGTGGTTGATGAGACCAAGCTAGAACTGCTGAGAAACCATAATGAAGAACTTGAGTGGGAGGTTGGAGAGCTGAAGAAGAAAATTGATGAATTTGAAGTAAAGTATGGTGAAGTGGAAATGGAGAGTAAAGCTAGACTCAAGGAGGCTGAAGAGGCACAATTGAAATCATTGCAACTTCAAGAGTCTATTGAGAGATTGGAATCAAATTTATCTAGCCTCGAGTCTGAGAACCAGGTGCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAACGACCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGCTCTCCGCAACCGGACGGTGGCCGTCGAGCACATATCTGTTCCTACTAGGGGCCTTGCAGAAAGCAAGGAACCATCTACTGTTCCTGTCCTAGCTAAACAAGGATCACTTACAGAGAAGCAACAGGAAAATCACGACGTCCTGCTCAAGTGCTTAGGAGAAGACAAGCGTTTCGACAAGGGCAGACCAGTTGCAGCTTCAACCAATACAAGCACGGTAGCTTCACATCGAAATCGAGCTTCTCCCACCTCCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCGTCAGTGGGGTTGGGAGCTTCCAGTGGATATAGTGGAATGGTGGGCAAGTCAAACAATCAATCCAAAGTTGAAGCCAAGTACCCAGCGCTGCTTTTCAAGCAACATCTGGCTGCATGCGCACCAAGATCAGCGAGGGCCAGATCAATAAGAGGGCCATCTAAAAACATCCATTCAAACATTGTTGCAAAGCAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTCATAAGCTAAACCAGACATTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATCAAAAGCATCTTCTTCCACGTTTTCTCATTCATAAACGTCCAGCTTTTCAATAGCTTGTTGCTACGACGCGAGTGCTGTTCCTTCAGTAATGGAGAGTACTTGAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGCCACAAAGCTACTGACACGTATGCTGGTTCTTCCTGGGATGAACTTCAACATATCAGACAAGCAGTAGGATTTCTGGTGTTACTTCAGAAGTCACAGAAAAAAATATTCCGCTCCTTCGCCGAGGACGGCGAGGTTAACCTGTCCGACGTCGACCCGCCACCACTTATGAGACAAAAATCAGATTTCCATTTTCTTCTGCCGCAGCAAATGATGATGACAAAGAGG 4713 43.88 NSIVVGPKFDDRIEQKQLRINHGIYKFFVNICFSAELWPKYGTPVNIVVGSHVWVEDPEDAWIEGQVTGINGKNATILTTNEKSIVAEISRIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFALNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPETRNAMDVVGISEDEQDAIFRVVAAILHLGNIDFMKGKEFDSSKVKDEKSNYHLETAAELLMCDAKALEHSLCQRVIVTPDGNITKPLDPDAAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSSSHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKGTSSVVVLSCSMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVGYISRVTYQADHFLDKNKDYVVAEHQALLDASKCSFVANLFPPLPEESSKQSKFSSIGTRFKHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKFIFESRLKGTSSVVVLSCSMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVGYISRVTYQADHFLDKNKDYVVAEHQALLDASKCSFHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVGYISRVTYQADHFLDKNKDYVVAEHQALLDASKCSFVANLFPPLPEESSKQSKCVKPNAVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMSLKGYQIGKTKVFLRAGQMAEMDARRTEILANAVRRIQRQIRTHLTRKEFIALRKATIHMQKLWRGQLARKLYEELRREAASIRIQKHARAHADRKSYKRLLESAIVIQTGMRGMRARNEYRHRRRTKAAIIIQTEWRRVSAISAYKQHRIATLALQCLWRSKVARMELRKLRMAARETGALKEAKDKLEKQMQGQLNEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLELLRNHNEELEWEVGELKKKIDEFEVKYGEVEMESKARLKEAEEAQLKSLQLQESIERLESNLSSLESENQVLRQQALVAADNDLKSKIGSLEAENEALRNRTVAVEHISVPTRGLAESKEPSTVPVLAKQGSLTEKQQENHDVLLKCLGEDKRFDKGRPVAASTNTSTVASHRNRASPTSLFGRMAYGLRSSSVGLGASSGYSGMVGKSNNQSKVEAKYPALLFKQHLAACAPRSARARSIRGPSKNIHSNIVAKQQASSIHWQSIVHKLNQTLDIMSENHVPSMIIKSIFFHVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCHKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKKIFRSFAEDGEVNLSDVDPPPLMRQKSDFHFLLPQQMMMTKR 1571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7142836 7158187 + Cp4.1LG12g07130.1 Cpe12g00790 478787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00790 1571 PANTHER MYOSIN 580 712 - -
Cpe12g00790 1571 PANTHER MYOSIN 1159 1326 - -
Cpe12g00790 1571 PANTHER MYOSIN 59 284 - -
Cpe12g00790 1571 ProSiteProfiles IQ motif profile. 983 1012 IPR000048 GO:0005515
Cpe12g00790 1571 Gene3D - 959 1010 - -
Cpe12g00790 1571 Gene3D - 1011 1061 - -
Cpe12g00790 1571 Coils Coil 1245 1265 - -
Cpe12g00790 1571 PANTHER MYOSIN-12 59 284 - -
Cpe12g00790 1571 ProSiteProfiles IQ motif profile. 1008 1034 IPR000048 GO:0005515
Cpe12g00790 1571 PANTHER MYOSIN 713 855 - -
Cpe12g00790 1571 PANTHER MYOSIN-12 713 855 - -
Cpe12g00790 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 579 712 IPR027417 -
Cpe12g00790 1571 Gene3D Kinesin motor domain 97 295 IPR036961 -
Cpe12g00790 1571 ProSiteProfiles IQ motif profile. 960 987 IPR000048 GO:0005515
Cpe12g00790 1571 ProSiteProfiles Myosin motor domain profile. 102 957 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Pfam DIL domain 1454 1531 IPR002710 -
Cpe12g00790 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 712 1011 IPR027417 -
Cpe12g00790 1571 PANTHER MYOSIN-12 580 712 - -
Cpe12g00790 1571 PANTHER MYOSIN-12 1328 1531 - -
Cpe12g00790 1571 PANTHER MYOSIN-12 1159 1326 - -
Cpe12g00790 1571 Coils Coil 1102 1136 - -
Cpe12g00790 1571 SMART iq_5 982 1004 IPR000048 GO:0005515
Cpe12g00790 1571 SMART iq_5 1055 1077 IPR000048 GO:0005515
Cpe12g00790 1571 SMART iq_5 1078 1100 IPR000048 GO:0005515
Cpe12g00790 1571 SMART iq_5 959 981 IPR000048 GO:0005515
Cpe12g00790 1571 SMART iq_5 1030 1052 IPR000048 GO:0005515
Cpe12g00790 1571 SMART iq_5 1007 1029 IPR000048 GO:0005515
Cpe12g00790 1571 SMART MYSc_2a 96 958 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 PANTHER MYOSIN-12 855 1123 - -
Cpe12g00790 1571 PANTHER MYOSIN-12 284 580 - -
Cpe12g00790 1571 Pfam Myosin N-terminal SH3-like domain 50 84 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Gene3D Kinesin motor domain 852 892 IPR036961 -
Cpe12g00790 1571 Gene3D - 893 955 - -
Cpe12g00790 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1011 1108 IPR027417 -
Cpe12g00790 1571 Pfam Myosin head (motor domain) 284 571 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Pfam Myosin head (motor domain) 713 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Pfam Myosin head (motor domain) 855 945 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Pfam Myosin head (motor domain) 104 281 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Pfam Myosin head (motor domain) 580 711 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 PRINTS Myosin heavy chain signature 132 151 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 PRINTS Myosin heavy chain signature 214 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 PRINTS Myosin heavy chain signature 730 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 Gene3D - 580 712 - -
Cpe12g00790 1571 Gene3D - 421 579 - -
Cpe12g00790 1571 Gene3D - 713 851 - -
Cpe12g00790 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 580 IPR027417 -
Cpe12g00790 1571 Pfam IQ calmodulin-binding motif 963 980 IPR000048 GO:0005515
Cpe12g00790 1571 Pfam IQ calmodulin-binding motif 984 1003 IPR000048 GO:0005515
Cpe12g00790 1571 Pfam IQ calmodulin-binding motif 1033 1052 IPR000048 GO:0005515
Cpe12g00790 1571 Pfam IQ calmodulin-binding motif 1010 1029 IPR000048 GO:0005515
Cpe12g00790 1571 Gene3D Myosin VI head, motor domain, U50 subdomain 296 417 - -
Cpe12g00790 1571 ProSiteProfiles IQ motif profile. 1079 1108 IPR000048 GO:0005515
Cpe12g00790 1571 Coils Coil 1163 1239 - -
Cpe12g00790 1571 ProSiteProfiles Dilute domain profile. 1377 1571 IPR002710 -
Cpe12g00790 1571 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 48 97 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe12g00790 1571 SMART DIL_2 1453 1540 IPR002710 -
Cpe12g00790 1571 ProSiteProfiles IQ motif profile. 1031 1060 IPR000048 GO:0005515
Cpe12g00790 1571 PANTHER MYOSIN 855 1123 - -
Cpe12g00790 1571 PANTHER MYOSIN 1328 1531 - -
Cpe12g00790 1571 PANTHER MYOSIN 284 580 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00790 Cpe17g00648 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00790 Cpe-Chr12:7142836 Cpe11g01007 Cpe-Chr11:8497930 1.02E-46 dispersed
Cpe12g00790 Cpe-Chr12:7142836 Cpe17g00648 Cpe-Chr17:5286872 2.00E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00790 K10357 - csv:101207221 1272.3