Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00823 ATGTGCAAGGCACGTGCCTTTTCTCCCACCAGCTCATCCTCGAGTATTCAATTTGCGAAAATTTGTTCCCTTCAGTATTGTGTCGTCACCTTGGCTTTTCGCTTCAGTCCTTCGTCAATTGGGAAATTAGGGTTTACTTTTCCTTTTCGTGAAATGGCTATGGCTGGGCGTATCAGATCGATCATCCCTGTATTCAATCAGATTCTGAAATCGGAATCACGGACTCAGAGACCTGCTCTTCAAAGAGCCCTACTTTGCCCCACGACTGCCAACTTCGAGGTCTCGAGGAACTATGCAACTGCTTCCAATAAAAGTGAGGTCAAAGTTAAGGTTCCTCTGGCTTTGTTTGGGGGGTCTGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGTTGAGACAGAGCTTTTTGACCTTGTTGAGGCTTCACAGAGAAGTGCCACCTTTTCTCAGTTCATAAGAGATCCCTCTGTCCCTGCAGATACTAGGGTCAAGGCTATGACTGATATTTGCACAGCTGCTAAATTTTCAGAAGTTACAAAAAACTTTTTGGTTGTACTGGCTGAATATGGAAGGCTGAAATACATAGACAGCATTGCAAATAAGTTTCAGGAGTTGACAATGGCTCATAGAGGAGAGGTGAAGGCCATTGTGACTACAGTTATTCCCCTCCCTGCTGAAGAAGAGAAAGAACTGAAAGAGACCCTGCAGGATATTATCGGAGAGGGGAAAAAGGTCAAGCTTGAACAGAAGATTGATCCAAGTATTCTCGGCGGGCTAGTCGTAGAATTTAGCGAAAAACTGTTCGACATGTCCATTAAGACCAGAGCACGACAGATGGAGAGGTTCTTGCGAGAACCTGTGAACCTCGACAACCTCTGA 903 44.85 MCKARAFSPTSSSSSIQFAKICSLQYCVVTLAFRFSPSSIGKLGFTFPFREMAMAGRIRSIIPVFNQILKSESRTQRPALQRALLCPTTANFEVSRNYATASNKSEVKVKVPLALFGGSGNYASALYIAAVKANSLDKVETELFDLVEASQRSATFSQFIRDPSVPADTRVKAMTDICTAAKFSEVTKNFLVVLAEYGRLKYIDSIANKFQELTMAHRGEVKAIVTTVIPLPAEEEKELKETLQDIIGEGKKVKLEQKIDPSILGGLVVEFSEKLFDMSIKTRARQMERFLREPVNLDNL 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7341391 7346241 + Cp4.1LG12g06780.1 Cpe12g00823 478820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00823 300 Gene3D - 119 211 IPR026015 -
Cpe12g00823 300 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 87 293 - -
Cpe12g00823 300 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 121 290 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 Hamap ATP synthase subunit delta [atpD]. 114 293 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 Pfam ATP synthase delta (OSCP) subunit 120 289 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 253 272 IPR020781 GO:0015986|GO:0016020|GO:0046933
Cpe12g00823 300 PRINTS ATP synthase delta subunit signature 199 213 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 PRINTS ATP synthase delta subunit signature 188 199 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 PRINTS ATP synthase delta subunit signature 251 266 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 PRINTS ATP synthase delta subunit signature 118 137 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 PRINTS ATP synthase delta subunit signature 266 284 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 PANTHER ATP SYNTHASE DELTA CHAIN 87 293 IPR000711 GO:0015986|GO:0046933
Cpe12g00823 300 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 119 220 IPR026015 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00867 Cpe12g00823 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00964 Cpe-Chr6:9084013 Cpe12g00823 Cpe-Chr12:7341391 1.91E-11 dispersed
Cpe12g00823 Cpe-Chr12:7341391 Cpe02g01582 Cpe-Chr2:13335417 1.48E-115 wgd
Cpe12g00823 Cpe-Chr12:7341391 Cpe03g00867 Cpe-Chr3:5479933 4.74E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00823 K02137 - csv:101206351 382.874