Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00834 ATGGCGATGACTAGGGTTCATGAGCCATCGCGATCCTTAGCAGGTAATACATGCACCATTCGGCTGACTGAAATTTTCGGGCGGGCGACCAAGTCTATTTTGGGCTTCTTTCTCATGATGGGTCTCTGCAATGGCGTGCATTACCTTTTGAGACCTTTTTCTCAACCTCGCACTACTTCTGATACGATCGTTGGTTTGGTTGTTGGAAACTTCATGAGGAAAGAACTCGATCTGTCAATACATAAGACGCTGCGTTATATTGTCGACTTTGGTATGACATGCTATATGTTTGTGCTGGGATTGGAGATGGATCCATGTGTACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCCGGAATGATTTCAACACTCATCTTAGCCTGTTCCACAATCCCATTTATTAGCTTTTCGAAGTCGAAAGAGATCAGTTTCATCCTCTCGCTCTCAACTGTTCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCAATCTTAAAATAGGCAGGTCGGATATAGGCCGACTTGTTATTGCTGCTGGAATGCATTCTGATTTTATATCCACTCTCGCAATCTGTATAGGTTATCTATTTTGCCAATGCCAAGAGACGCGTCTCTCCATTATAAATGGTTTTCAATTAGGTTTTGTTCTATTGATCCAGATGATAATGGCGGCGAAGGTTTCACCAATATTCATGAACTGGGTGAATAACGAAAACCCCGAGGGTAAACCTATGAAGGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCTGCTGCCCTACTATATTTGGTTACAACCCGACTCTCAGTGCATTCTTGGCTGGAACATTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAACTACCTGCTTACTACTGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGAGTGACTTTGAGCCTGGACAAATAATAACATGGGTCAGATTACTTCTGCTTTTTGCTATTGTAACCGTAGGAAAAGTTGTTGGTACTGTCATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCTGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTGGCCATATCTGCAAAAATAGCTGGAAAGATATCTACATCTACGAGCATTGCGATGGTATTTGTAATCTTCTTCACAGTCGTGCATGCTCCAAAAGTTGTAGCTCATATAATTAGAAGGGCGAGGAAACGCACACCTACACATCGAATGGCTCTCGAATTGCTTGACCCATCAAGTGAGCTTAAGATCTTGTTATGTATACATGGACCTCATAACACTGGAGCAGCCATTAACATCATGGAGATTTCTCGGGGGACGGCTAACCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACGTTAGTGCAGGGTGAAGGAGTGGACACTGTAACTGTAACCCACACAGGAGTGACTCAAATGAGAGACCAAGTTACTACTGCATTTCAGAGATATGTAGATGAAAATGGAGATGGAATTACCCTTAGAAGAATGTTGGCTCTCTCAGCATTCAATTGTATGGCACAAGACATTTGCATTTTAGCGGAGGACTTGTTGGGTGCTCTTATCATACTGCCATTCCACAAGAACCAGCGCGGAGATGGGTCGTTGAGCGAGGGCCAAGCAGGTTTCCGCTATGTGAACCGCAAGGTTATCAGACACGCCCCTTGTTCCGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGGTCGTACGTAACCCTGAACGTGGCAGTGATCTTCATTGGCGGTAAAGACGACCGAGAAGCATTAGCCTACGCAGGTCGAGTAGCTAGGCATCCCGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGATCAGTGTTGCTGAGCAGGAAGAGGAAATGAGACAAGACGACGAATGCTTTGCTTATTTTTATGAACGACACGTGGCTGGTGGGCACGTCGCTTACGTTGAAAAACACATGGCCAGTTCCGCAGAGACGTATTCTACTTTGAAATCACTGGAAGGTCAATACACTCTCGTAATCGTAGGTCGAGGTGGGGGAGTGAACTCGGTGTTAACTTACGGGATGAATGATTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGACGTTCTCTCCGGGTCTGAATTCTCCGCTAAGACCTCGGTTTTGATCATCCATCAACACAATCTAAAAGGTGAACTAGATGGACTTGATGATGATTTTTCAATAATGTAG 2373 44.46 MAMTRVHEPSRSLAGNTCTIRLTEIFGRATKSILGFFLMMGLCNGVHYLLRPFSQPRTTSDTIVGLVVGNFMRKELDLSIHKTLRYIVDFGMTCYMFVLGLEMDPCVLFKAPTRDAKVAYAGMISTLILACSTIPFISFSKSKEISFILSLSTVLSSTASPVLTRLITNLKIGRSDIGRLVIAAGMHSDFISTLAICIGYLFCQCQETRLSIINGFQLGFVLLIQMIMAAKVSPIFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCCCPTIFGYNPTLSAFLAGTFLPREGRVSRWAIGKINYLLTTVFYPIFFFWMGVESKLSDFEPGQIITWVRLLLLFAIVTVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAISAKIAGKISTSTSIAMVFVIFFTVVHAPKVVAHIIRRARKRTPTHRMALELLDPSSELKILLCIHGPHNTGAAINIMEISRGTANPGVVVYVTDMIELTDEIAATLVQGEGVDTVTVTHTGVTQMRDQVTTAFQRYVDENGDGITLRRMLALSAFNCMAQDICILAEDLLGALIILPFHKNQRGDGSLSEGQAGFRYVNRKVIRHAPCSVGILVDRGLGSVEKISRSYVTLNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRQDDECFAYFYERHVAGGHVAYVEKHMASSAETYSTLKSLEGQYTLVIVGRGGGVNSVLTYGMNDWQQCPELGPIGDVLSGSEFSAKTSVLIIHQHNLKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7403559 7407578 - Cp4.1LG12g06710.1 Cpe12g00834 478831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00834 790 Gene3D - 29 429 IPR038770 -
Cpe12g00834 790 Gene3D - 444 743 - -
Cpe12g00834 790 PANTHER CATION/H(+) ANTIPORTER 28 20 787 - -
Cpe12g00834 790 PANTHER CATION/H + ANTIPORTER 20 787 - -
Cpe12g00834 790 Pfam Sodium/hydrogen exchanger family 43 419 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00834 Cpe17g00698 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00834 Cpe-Chr12:7403559 Cpe05g01060 Cpe-Chr5:7011636 4.45E-107 dispersed
Cpe12g00834 Cpe-Chr12:7403559 Cpe17g00698 Cpe-Chr17:5553126 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00834 - - csv:101211645 1389.79