Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00863 ATGGATGATAGCTGTGCGGTGTGTGCCGATGCCCTTGAATGGGTTGCCTATGGCTCTTGCGGCCATCGGGATGTCTGCTCCACCTGTGTTGCTCGCCTTCGATTCATTTGCGGTGATCGCTGCTGTTGCATCTGCAAGTCTGAATCTACCGTCGTCTTCGTCACTAAGGCCTTAGGAGATTATACAAGGACTATTAACGACTTCACAGTCTTTCCTTCTGAACCTAGAGAAGGTCGTTGTGGATCCTATTGGTATCATGAAGACACGCAAGCATTTTTTGATGACGTCGACCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCAAAGCGCCGAGGAAGATTTCGGAATATTGAACAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGGAAGATTTTTATTTGTGAACAAAAGCTGTATAATAGAGCACAACTGAATCAGCACATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGACACCCAATGTGTGAGTATTGCAGGACTCCTTTTTACGGAGATAATGAGCTGTATACTCATATGTCAACAGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTATGAATATTATAAGAATTATGATGACCTGGAGGCAAATGAAACCTGCCTTTCTAAGAAGTTTATAGTGTTCCAATCTGAATCAGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTACAGATACCAACCAGTTTTCGATATCGAAGAAGTAATGACCAAGATAATCGCCGTGGTAGACGAACATTTCGTCGTGATTCTTCTGACGATCTACTTTCTGTAGCCATTCAAGAAAGTTTTGAAACAGCCAATGTTGATGACACCACTCATGACCCACTACCTAGCGGACAAGTAGACTCAGATCAGGGAAATATAAGCAACATTGATCCCTTAATTGAACCATTTGAATCATTATCCACAACAGATTCTGAATCAGCTTCTAGATACCTTCAAGCATTGGGTCATTCTAGGAATTCCCAATTGGGGCAATCATCCTTTCCACCCCTTTCAACAGCATCTAGCAGTAGCCATCCAAAACCCATTCAGGACAAAGATAATAACAGTATGGCTGCTCATCTTCGCCGCAAGAGGAATGTGACTGTAATAAATCCTGCCCAAGGTTGGCCAAAATCAAGTCGTGCGCCTGTGGTACCATCAAATAAATCATCTCAAGCTTGGCCTGCAATAAATGTCAATCATACGGCATCGAGCAGTTCTGGGCAGACTAAGGGTGTTGTGACCGTCAGTAATGGCTCTTCAGGCTCTGGTTACTCAAATGCTGCTCAAATGCATGCGAAGGGTAAGACTAGTTCTTCGAGTGGATCGGGTAGTAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCTCCCAATCTCACCGACATGGCTTATACTGAACCCTCGGTTAATGATTTCCCTCCTGTATCTGCGGCACAATCACGGAAGGTGCCCTCAAGTAGCCAGAGTTCGATGAACACGGAAGATGTCCAGACAGCAAATAAATCTCTAGTTGAAAAGATACGTGCTGCACTTGATTTTGACCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAAGGTCAGATCGACCCGGAAATGTACCTAGACTGTGTGCAGCAGTTCGGTTTGTCACATCTTGTGCTTGAACTGGCTAGGCTGTGTCCTGATGCTCAGAAACAGAAAGAACTCGTGGGGATCTATAATGCTAGTTTACAGAAAGAAGTGATCCAAGAAAATGGTAGGGCTCAAGATAGCATTCAAATTAAAGACAAGGGTAAGGGAAGGAAGGGTAAAGGGAAGTCTACAGATGTTAAAGACAGCAGTTCAAAGGACAGTTCAAAGGACAGATTAGCAGACAGTATCTTGAGCAGTGTTCGGGAGCTGCAGTCGAGTCTCAGGCCATTGGAGGAAGATGTTGAGGTATTATCGAAGGGTGAGTACCGTGGTTTGAAAGGCAAAACGAAGATATCATCCGATGACCAGCAAAGTGGGACAGGAGGACAAAACAGACAACCGTCTACTGGACTCTCGAACCACCAAAGCACAGGGGATGGAGATGGTGGGGGGAGCAAGCAAAGAAAGAAGACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCGGTTGCTGCACTCTTAGATTTAAAAAACTCCAACCCTGCTTCAGACTCGGACCCATCCGAAAGAGTCGAGGATGGGAACAATACCGCTGGGGCAGTGCCTGTTCGGGGTGTGTGGCGAAACGGTGCTCAGAGGCTTTTCTCCTAG 2448 44.98 MDDSCAVCADALEWVAYGSCGHRDVCSTCVARLRFICGDRCCCICKSESTVVFVTKALGDYTRTINDFTVFPSEPREGRCGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKIFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEYCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEANETCLSKKFIVFQSESEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNDQDNRRGRRTFRRDSSDDLLSVAIQESFETANVDDTTHDPLPSGQVDSDQGNISNIDPLIEPFESLSTTDSESASRYLQALGHSRNSQLGQSSFPPLSTASSSSHPKPIQDKDNNSMAAHLRRKRNVTVINPAQGWPKSSRAPVVPSNKSSQAWPAINVNHTASSSSGQTKGVVTVSNGSSGSGYSNAAQMHAKGKTSSSSGSGSSSSRISHSASAPNLTDMAYTEPSVNDFPPVSAAQSRKVPSSSQSSMNTEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDPEMYLDCVQQFGLSHLVLELARLCPDAQKQKELVGIYNASLQKEVIQENGRAQDSIQIKDKGKGRKGKGKSTDVKDSSSKDSSKDRLADSILSSVRELQSSLRPLEEDVEVLSKGEYRGLKGKTKISSDDQQSGTGGQNRQPSTGLSNHQSTGDGDGGGSKQRKKTSKFHRVRLGDGSVAALLDLKNSNPASDSDPSERVEDGNNTAGAVPVRGVWRNGAQRLFS 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7573980 7578593 - Cp4.1LG12g06390.1 Cpe12g00863 478860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00863 815 MobiDBLite consensus disorder prediction 638 678 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 423 553 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 437 521 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 644 678 - -
Cpe12g00863 815 CDD RING-HC_ZNF598 5 46 IPR041888 -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 528 553 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 381 407 - -
Cpe12g00863 815 PANTHER ZINC FINGER PROTEIN 598 1 813 IPR044288 GO:0061630|GO:0072344
Cpe12g00863 815 MobiDBLite consensus disorder prediction 711 815 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 381 409 - -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 716 747 - -
Cpe12g00863 815 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Cpe12g00863 815 PANTHER EBR1 1 813 - -
Cpe12g00863 815 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Cpe12g00863 815 MobiDBLite consensus disorder prediction 326 353 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00863 K22381 - csv:101214376 1327.38