Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00869 | ATGGTGGCTGAAGCAGAGGTTATTGTTTGTCCGAAGAGCCTCCCAGTTTTGGAGGTGCCGTATTACAGTAAGGAGACTCGTCTTGAGGAAATTGAGTCCATTAATGGTGGTATTTCGACTCTCGATCGTGTTCGTGCTTCCGAACCGGTTTCTTCCAGTTCACAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGCCGATAAGGCGAAGGATAAGGAATTTCCGAATCTCCGGTCGGGTAGCTTTGCTGATATTGGACCGAGGAGATTCATGGAAGATGAACATATAAGGATAGACGATTTGTCTTCGCATTTAGGATCGCTGTTTAAGTTTCCTAAGCCAAGTGCCTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTCAATTTTCCTCAAATGCCAGATTTCGATGAAGTCTTGCCGGAGGAGATACAAAATTGCCTCCGGAAAGCATTTCTTCTGGCTGATCAAGCTCTAGCTGATGATTCCGGTGTCAGTAATTCGTGTGGGACGACGGCCCTGACAGCCCTTGTGCTTGGAAGCCGGAATGGAGAGGCAGTAGATATGTCACAAGACCACCGGCCGATTTATTCGCTGGAGAAGCAACGGGTGGAAGAGCTGGGTGGCTATGTTGATGGTGGCTATCTGAACGGTGTTTTATCGGTGTCGCGGGCGTTGGGGGATTGGGACATGAAGCTCCCACATGGCTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAAGCAGGTTGTTCTTACAGAGGAGGATGAGTTCTTGATCATAGCTTGTGATGGGATTTGGGATGTGATGTCGAGCCAGCAAGCAGTCAATGTAGTTCGACAGGGGCTTCAACGGCACGATGACCCAGAGCGGTGTGCTCGAGAGCTCGTCCTGCGTGCTTTGCGATTGGACTCGTTCGATAATCTGACTGTTGTGGTGGTTTGCTTCTCTAGTTTCCATGGCGACGGTTCCTCACTACCACAGCAGAGAAAATTGAGATACTGCAGTCTGTCTGCGCAGGCTCTTTGTAGTCTGCAGAGATGGTTGGATAACAGTGGATGCCAA | 1125 | 48.53 | MVAEAEVIVCPKSLPVLEVPYYSKETRLEEIESINGGISTLDRVRASEPVSSSSQSDIKPMKKIPDSDADKAKDKEFPNLRSGSFADIGPRRFMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVNFPQMPDFDEVLPEEIQNCLRKAFLLADQALADDSGVSNSCGTTALTALVLGSRNGEAVDMSQDHRPIYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECKQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARELVLRALRLDSFDNLTVVVVCFSSFHGDGSSLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7607690 | 7610096 | - | Cp4.1LG12g06400.1 | Cpe12g00869 | 478866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00869 | 375 | Gene3D | - | 62 | 341 | IPR036457 | - | |
Cpe12g00869 | 375 | ProSitePatterns | PPM-type phosphatase domain signature. | 120 | 128 | IPR000222 | GO:0043169 | |
Cpe12g00869 | 375 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 355 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe12g00869 | 375 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 355 | - | - | |
Cpe12g00869 | 375 | SUPERFAMILY | PP2C-like | 77 | 337 | IPR036457 | - | |
Cpe12g00869 | 375 | Pfam | Protein phosphatase 2C | 91 | 328 | IPR001932 | - | |
Cpe12g00869 | 375 | MobiDBLite | consensus disorder prediction | 61 | 80 | - | - | |
Cpe12g00869 | 375 | MobiDBLite | consensus disorder prediction | 45 | 60 | - | - | |
Cpe12g00869 | 375 | ProSiteProfiles | PPM-type phosphatase domain profile. | 81 | 336 | IPR001932 | - | |
Cpe12g00869 | 375 | CDD | PP2Cc | 81 | 336 | IPR001932 | - | |
Cpe12g00869 | 375 | MobiDBLite | consensus disorder prediction | 45 | 83 | - | - | |
Cpe12g00869 | 375 | SMART | PP2C_4 | 71 | 334 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00869 | Cpe17g00726 | CCT | |
Cpe12g00869 | Cpe17g00726 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe12g00869 | Cpe-Chr12:7607690 | Cpe17g00084 | Cpe-Chr17:475767 | 3.29E-107 | dispersed | |
Cpe12g00869 | Cpe-Chr12:7607690 | Cpe17g00726 | Cpe-Chr17:5769558 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00869 | K14803 | - | csv:101216626 | 640.958 |