Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00869 ATGGTGGCTGAAGCAGAGGTTATTGTTTGTCCGAAGAGCCTCCCAGTTTTGGAGGTGCCGTATTACAGTAAGGAGACTCGTCTTGAGGAAATTGAGTCCATTAATGGTGGTATTTCGACTCTCGATCGTGTTCGTGCTTCCGAACCGGTTTCTTCCAGTTCACAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGCCGATAAGGCGAAGGATAAGGAATTTCCGAATCTCCGGTCGGGTAGCTTTGCTGATATTGGACCGAGGAGATTCATGGAAGATGAACATATAAGGATAGACGATTTGTCTTCGCATTTAGGATCGCTGTTTAAGTTTCCTAAGCCAAGTGCCTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTCAATTTTCCTCAAATGCCAGATTTCGATGAAGTCTTGCCGGAGGAGATACAAAATTGCCTCCGGAAAGCATTTCTTCTGGCTGATCAAGCTCTAGCTGATGATTCCGGTGTCAGTAATTCGTGTGGGACGACGGCCCTGACAGCCCTTGTGCTTGGAAGCCGGAATGGAGAGGCAGTAGATATGTCACAAGACCACCGGCCGATTTATTCGCTGGAGAAGCAACGGGTGGAAGAGCTGGGTGGCTATGTTGATGGTGGCTATCTGAACGGTGTTTTATCGGTGTCGCGGGCGTTGGGGGATTGGGACATGAAGCTCCCACATGGCTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAAGCAGGTTGTTCTTACAGAGGAGGATGAGTTCTTGATCATAGCTTGTGATGGGATTTGGGATGTGATGTCGAGCCAGCAAGCAGTCAATGTAGTTCGACAGGGGCTTCAACGGCACGATGACCCAGAGCGGTGTGCTCGAGAGCTCGTCCTGCGTGCTTTGCGATTGGACTCGTTCGATAATCTGACTGTTGTGGTGGTTTGCTTCTCTAGTTTCCATGGCGACGGTTCCTCACTACCACAGCAGAGAAAATTGAGATACTGCAGTCTGTCTGCGCAGGCTCTTTGTAGTCTGCAGAGATGGTTGGATAACAGTGGATGCCAA 1125 48.53 MVAEAEVIVCPKSLPVLEVPYYSKETRLEEIESINGGISTLDRVRASEPVSSSSQSDIKPMKKIPDSDADKAKDKEFPNLRSGSFADIGPRRFMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVNFPQMPDFDEVLPEEIQNCLRKAFLLADQALADDSGVSNSCGTTALTALVLGSRNGEAVDMSQDHRPIYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECKQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARELVLRALRLDSFDNLTVVVVCFSSFHGDGSSLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7607690 7610096 - Cp4.1LG12g06400.1 Cpe12g00869 478866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00869 375 Gene3D - 62 341 IPR036457 -
Cpe12g00869 375 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Cpe12g00869 375 PANTHER PROTEIN PHOSPHATASE 2C 1 355 IPR015655 GO:0004722|GO:0006470
Cpe12g00869 375 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 355 - -
Cpe12g00869 375 SUPERFAMILY PP2C-like 77 337 IPR036457 -
Cpe12g00869 375 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Cpe12g00869 375 MobiDBLite consensus disorder prediction 61 80 - -
Cpe12g00869 375 MobiDBLite consensus disorder prediction 45 60 - -
Cpe12g00869 375 ProSiteProfiles PPM-type phosphatase domain profile. 81 336 IPR001932 -
Cpe12g00869 375 CDD PP2Cc 81 336 IPR001932 -
Cpe12g00869 375 MobiDBLite consensus disorder prediction 45 83 - -
Cpe12g00869 375 SMART PP2C_4 71 334 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00869 Cpe17g00726 CCT
Cpe12g00869 Cpe17g00726 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00869 Cpe-Chr12:7607690 Cpe17g00084 Cpe-Chr17:475767 3.29E-107 dispersed
Cpe12g00869 Cpe-Chr12:7607690 Cpe17g00726 Cpe-Chr17:5769558 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00869 K14803 - csv:101216626 640.958