Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00950 ATGGCCGGTATTAAAGTTCACGGAATCCCCACTTCTACAGCCACAGCTAGGGTTCTAGCTGCCCTCTACGAAAAGGGCCTTCAATTCGAGCTTGTTAATGTTAAGTTGCATGAAGGGGAACACAAGAAAGAGCCCTTCCTCTCAATCAATCCCTTTGGTCAAGTTCCTGGGTTTAACGATGGAGATCTGACGCTTTTTGAATCCAGGGCGATCACGCAGTATATCTCGGGAAATTATGCTAGCAATGGAACCGAGTTGATTCCGAAAGACTCCAAGAAAGGGGCGGTCGTGTTAACGTGGATCGAGGTGGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTGGTGTTCGAGTTCTGCCTAAAGCCATTATTTGGGCTGGGTGATGCAGATCCTGCAGTGGTTGAGAAAAGCGAAGCTGATTTAGGCCAAGTTCTTGACATCTATGAGAAAAGGCTGTCCGGGTCCAAATACTTGGGAGGTGACTCCTTCAGCTTGGCTGATCTGCACCATCTCCCCGTATTAGGCTACCTGTTGGCTACACCGTCGAAGAAACTGTTTGAATCTAGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCCAGGCCATCTTGGGCCAAAGTCCTTGCTCTCCGCAAGTGA 645 48.99 MAGIKVHGIPTSTATARVLAALYEKGLQFELVNVKLHEGEHKKEPFLSINPFGQVPGFNDGDLTLFESRAITQYISGNYASNGTELIPKDSKKGAVVLTWIEVESHHFDPVAMKLVFEFCLKPLFGLGDADPAVVEKSEADLGQVLDIYEKRLSGSKYLGGDSFSLADLHHLPVLGYLLATPSKKLFESRPHVNAWVADIIARPSWAKVLALRK 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8066961 8068494 - Cp4.1LG12g05490.1 Cpe12g00950 478947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00950 214 CDD GST_C_Phi 92 210 IPR034347 -
Cpe12g00950 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cpe12g00950 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 214 - -
Cpe12g00950 214 SUPERFAMILY Thioredoxin-like 2 88 IPR036249 -
Cpe12g00950 214 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Cpe12g00950 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Cpe12g00950 214 Gene3D - 90 214 - -
Cpe12g00950 214 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cpe12g00950 214 Gene3D Glutaredoxin 1 87 - -
Cpe12g00950 214 SFLD Main (cytGST) 1 212 - -
Cpe12g00950 214 CDD GST_N_Phi 4 76 - -
Cpe12g00950 214 Pfam Glutathione S-transferase, C-terminal domain 109 204 IPR004046 -
Cpe12g00950 214 SFLD Main.5: Phi-like 1 212 - -
Cpe12g00950 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00659 Cpe-Chr1:3820250 Cpe12g00950 Cpe-Chr12:8066961 7.41E-08 dispersed
Cpe12g00950 Cpe-Chr12:8066961 Cpe17g00797 Cpe-Chr17:6242852 2.02E-108 dispersed
Cpe12g00950 Cpe-Chr12:8066961 Cpe17g00796 Cpe-Chr17:6241127 3.43E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00950 K00799 - csv:101212291 380.948