Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g01044 ATGGGTAACGCCGACTACGTGTACCCATCGGCGGCGGAAGGCGGCGGGAGCTTGCATAGGGCGGCGATTCCGCCGCCGCAGCCGTTCGTCAAGTCACTGAAGAATTCTCTTAAGGAGACGTTTTTCCCCGACGACCCGCTCCGGCAGTTCAAGAACCAATCGGCGAGGAGGAAGGTTGTTCTGGGTTTGCAGTACTTTTTCCCTGTAGTGGAATGGGGGCCTCGTTATAATCTCGGGCTCCTGAAATCGGATCTCATCTCCGATTCGAGTTTTATTCCGCCGCTGATATATGCAATGATGGGAAGCTCGAAGGATTTGGCTGTCGGAACGGTGGCGGTGGCGTCGCTTCTAATGGGCGCAATGTTAGGGGCGGAGGTTAACGCCGTTCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACCGCCACTTTCTTCGCCGGATGGAGATGGCAAAGTGGAGTATTGGGATGCGGTTTTCTACTCTTCCTCCTCGTCACCAGATACTTTAGTAAGAAAAAACCGAAATTCTTTTGGATATCAGCAATGGCGCCTTTAACGTCCGTGATTTTAGGAAGCCTTTTAGTGTTTCTCACTCATGCGGAAAAGCACGGCGTCGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCTATTACAGATTTGGGGTTGGGGTCGCCTTATTTTTCCATAGCTATTAAAACTGGCATTATTACTGGCGTCATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCGATGTTCAAGCATTACAACATCGATGGCAACAAGGAAATGGTGGCTATTGGCACCATGAACATGGTCGGCTCTTGCTTCTCCTGCTATCTCACCACAGGCCCGTTTTCGCGATCGGCAGTGAACTACAATGCAGGATGCAAAACGGCGGTATCGAACGTGGTAATGGCGATTGCAGTGATGCTGACGCTGCTGTTCTTGACTCCTCTGTTCTACTATACTCCTATTGTTGTGCTTTCTTCTATCATCATTTCCGCCATGCTTGGCCTCATCGATTACGACGCCGCTATTCACTTGTGGAAGGTCGATAAGTTCGATTTCCTTGTCTGCATTGCCGCTTATGCTGGTGTTGTCTTTGCTAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTGATATCTCTGCTAAGACTACTTTTGTTCGTTGCAAGGCCGAGGACACTCGTGCTTGGAAACCTTCCCAATTCCACGGTTTACAGGAACGTTGAGCAATACCCGAATGCCGATAATGTTCCCGGCATTCTCATACTTGAGATCGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGACAGGATAAAAGCTTCCGGCGAAAGTACCTTACAATATGTAGTTCTGGACATGAGTGCTGTTGGCAACATTGATACGAGTGGAATAAGCATGTTTGAAGAGATCAAGAACATTTTAACTAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGAGCTGAGGTGATGAAGAAGCTGGACAAGGGCAAGTTCATCGAAAGCCTTGGACACGAATGGATCTATCTTACTGTCGCTGAAGCTGTAGCAGCCTGCAACTATAGGCTTCACTCTTGCAAACCAAACCTTGTAACTGATGAGAAAGCAGAGCCATGGAACAATGTCTAA 1695 47.91 MGNADYVYPSAAEGGGSLHRAAIPPPQPFVKSLKNSLKETFFPDDPLRQFKNQSARRKVVLGLQYFFPVVEWGPRYNLGLLKSDLISDSSFIPPLIYAMMGSSKDLAVGTVAVASLLMGAMLGAEVNAVQNPTLYLHLAFTATFFAGWRWQSGVLGCGFLLFLLVTRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITDLGLGSPYFSIAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFYYTPIVVLSSIIISAMLGLIDYDAAIHLWKVDKFDFLVCIAAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADNVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEIKNILTRRGLKIVLANPGAEVMKKLDKGKFIESLGHEWIYLTVAEAVAACNYRLHSCKPNLVTDEKAEPWNNV 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8684374 8689105 - Cp4.1LG12g11430.1 Cpe12g01044 479041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g01044 564 PANTHER SULFATE TRANSPORTER 148 557 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g01044 564 ProSiteProfiles STAS domain profile. 418 541 IPR002645 -
Cpe12g01044 564 SUPERFAMILY SpoIIaa-like 423 542 IPR036513 -
Cpe12g01044 564 TIGRFAM sulP: sulfate permease 148 537 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g01044 564 Pfam Sulfate permease family 148 367 IPR011547 GO:0016021
Cpe12g01044 564 Pfam Sulfate permease family 74 147 IPR011547 GO:0016021
Cpe12g01044 564 PANTHER SULFATE TRANSPORTER 2 87 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g01044 564 Gene3D STAS domain 398 545 IPR036513 -
Cpe12g01044 564 PANTHER SLC26A/SULP TRANSPORTER-RELATED 148 557 - -
Cpe12g01044 564 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 87 - -
Cpe12g01044 564 PANTHER SULFATE TRANSPORTER 88 147 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe12g01044 564 PANTHER SLC26A/SULP TRANSPORTER-RELATED 88 147 - -
Cpe12g01044 564 CDD STAS_SulP_like_sulfate_transporter 419 534 - -
Cpe12g01044 564 Pfam STAS domain 419 537 IPR002645 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g01044 Cpe17g00870 CCT
Cpe12g01044 Cpe17g00870 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g01044 Cpe-Chr12:8684374 Cpe02g00526 Cpe-Chr2:3113853 4.18E-164 dispersed
Cpe12g01044 Cpe-Chr12:8684374 Cpe17g00870 Cpe-Chr17:6736358 0 wgd
Cpe12g01044 Cpe-Chr12:8684374 Cpe03g01459 Cpe-Chr3:11624141 0 wgd
Cpe12g01044 Cpe-Chr12:8684374 Cpe08g00279 Cpe-Chr8:1795968 3.06E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g01044 K17471 - zju:107426387 857.055