Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g01067 ATGGGACCTTTTTCAGCTCAACCGTCATCAGTCCTCCCAAGATCAATAACATCATGCAAAACAGCCAGAGACTTGAAGCAACTCCACGCTGTTTTCATCAAAACTGGTCAAATTCAAGACCCTCTTACGGCCGCTGAAGTGATCAGATTCTGTGCATTTTCTTCGCGACGCGATATCGATTATGCCCGCGCGGTCTTCCATCAGATGCCGGAACCCAATTGCTTCTGTTGGAACACCGTTTTGAGAGTTCTTGCTGAGAGCAACGACGAGCATCACCAATCGGAGGCTTTGATGCTCTTTCGCGGGATGTTGTGCGATGGGCGTGTGAAGCCCAATCGGTTCACTTTCCCCTCCGTGTTGAAGGCCTGCGCTAGAGCTTCGAGGCTTCGAGAGGGGAAACAGGTACATGGGTTGATTGTGAAGTTTGGGTTTGATGGGGATGAGTTTGTAATTAGTAATCTCGTTCGGATGTATGTTATGTGTGCGCTCATGGAAGATGCGTATTCTCTGTTTTGTAAGAGTGTTGTTGATTTTGATGGAGCCCCTGTACGTGGTGATTCCTTACATTTCCCTTCTTCTTCTTCTTCCTCCTCTTCTGTTTCTTCTGATGTTCTACTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGTGACACTCAAAACTTACTTTTATCTTCATGGAATTACTCTTTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTAGTGGAACTCTTCTGGTCTGCAGTGATTCTTCTTCTCCACAGTGGTCTAATCTCACTCTTTTCAAAGACCCTTCTCTTCATGTTCTCTCTCTGCAACTTCCATCTGCTAATCTTACTGGTTTATTGCCCAAGGAGCTTGGTGAGTTTACTATGCTCCAAAGCCTCTATCTAAGCATAAACTCTTTGACTGGAACCATTCCACTTGAACTCGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTGTTGACCGGAGCTCTTCCACCGTCGATCTGGAATCTGTGTGATAAACTTGTTTCTGTCAGGCTTCATGGAAATTCATTATCTGGGTCTCTGTCGGAGCCGGCTTTACCAAATTCCACCTGTAAGAATTTGAAGGCTTTGGATTTGGGCAACAACCAGATTTCAGGTACTTTCCCAGAATTCATTACAAGGTTTCAGGGTCTGAAAGAGCTTGATCTTGGAAAGAATTTGTTGTCTGGAAAAATCCCACAGAGCTTAGGCCAATTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTGTTAACTCAAAGTTTGGCGTTGAGGCTTTTGAAGGGAACAGTCCTTGGCTTTGTGGGGAGCCTTTGAAAAGTTGTGCAGGACCTTCCCATTTGAGTTCAGGTGCTATTGCTGGCCTTGTTATCGGCTTGATGACCGGGACGGTGGTTTTAGCGTCATTGCTTATTGGTTATATGCAAAACAAGAAGAAGAATAGGAGTGAGAGTGAAGATGACATTGAGGAAGGAGAAGATCAAGAGAATGGCGGCAGTGATGGAAAGCTCATTTTGTTTCAGGGTGGAGAGCATTTGACATTGGATGATGTCTTGAATGCTACAGGGCAGGTTATGGAGAAAACAAGCTATGGCACTATATATAAGGCAAAGCTTGCTGATGGAAGTACCATTGCTCTTAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGCTGGGAAAGATCCGTCATGAGAACTTGATTCCATTGAGAGCTTTCTATCAAGGGAGGAGAGGAGAGAAGCTCCTCATTTATGACTATCTCCCTATCAGAACTTTGCATGATTGTCTACATGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAGCCAGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATGGTGAAAGTGGCTGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGGTGTTGAAAGGGATCAGAAGTCTCATGGAAGATGGAATCGTTCAGGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCCGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGCTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACTGAAACAAGAAGTGAAATTGGTACGCCTTTTTGA 2229 44.37 MGPFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSRRDIDYARAVFHQMPEPNCFCWNTVLRVLAESNDEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGAPVRGDSLHFPSSSSSSSSVSSDVLLLLGKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSSGTLLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGLLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCDKLVSVRLHGNSLSGSLSEPALPNSTCKNLKALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGKIPQSLGQLELEKLNLSNNNFSGILPVFVNSKFGVEAFEGNSPWLCGEPLKSCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKNRSESEDDIEEGEDQENGGSDGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGSTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGRRGEKLLIYDYLPIRTLHDCLHDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSLMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8904007 8912222 - Cp4.1LG12g11200.1 Cpe12g01067 479064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g01067 742 MobiDBLite consensus disorder prediction 722 742 - -
Cpe12g01067 742 Pfam Leucine rich repeat 371 429 IPR001611 GO:0005515
Cpe12g01067 742 SUPERFAMILY Protein kinase-like (PK-like) 544 723 IPR011009 -
Cpe12g01067 742 MobiDBLite consensus disorder prediction 500 520 - -
Cpe12g01067 742 Gene3D Phosphorylase Kinase; domain 1 521 615 - -
Cpe12g01067 742 Gene3D Tetratricopeptide repeat domain 8 186 IPR011990 GO:0005515
Cpe12g01067 742 Gene3D Transferase(Phosphotransferase) domain 1 616 735 - -
Cpe12g01067 742 Coils Coil 494 514 - -
Cpe12g01067 742 Gene3D Ribonuclease Inhibitor 344 463 IPR032675 -
Cpe12g01067 742 SUPERFAMILY L domain-like 217 437 - -
Cpe12g01067 742 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 626 742 - -
Cpe12g01067 742 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 190 626 - -
Cpe12g01067 742 Gene3D Ribonuclease Inhibitor 206 343 IPR032675 -
Cpe12g01067 742 MobiDBLite consensus disorder prediction 723 742 - -
Cpe12g01067 742 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 626 742 - -
Cpe12g01067 742 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 190 626 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g01067 Cpe17g00980 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g01067 Cpe-Chr12:8904007 Cpe01g01012 Cpe-Chr1:5980111 2.08E-14 dispersed
Cpe15g00106 Cpe-Chr15:783921 Cpe12g01067 Cpe-Chr12:8904007 1.71E-24 transposed
Cpe15g00694 Cpe-Chr15:7486347 Cpe12g01067 Cpe-Chr12:8904007 8.92E-30 transposed
Cpe17g00980 Cpe-Chr17:7470080 Cpe12g01067 Cpe-Chr12:8904007 0 transposed
Cpe12g01067 Cpe-Chr12:8904007 Cpe17g00979 Cpe-Chr17:7467907 5.54E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g01067 - - cmo:103497530 774.237