Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g01135 | ATGGACAATCCCGTGAATATCGTTGTTGGTTCTCACATATGGGTGGGAGATATAGAGTCTGTTTGGATCGATGGACTCGTATTGAACATCATTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGGCAGGTGGTTGTAAAAATGTCGAATCTATATCCAAGGGATGCAGAAGCTCCTGCTACTGGAATTGACGATATGACTAGAATGTCGTATTTGAATGAGCCTGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAATATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAATCTGTATGATCCGTGTGTGATGGAGCAGTACAAGGGAGCACCAGTGGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTCGCATATAGGGCTATGATAACTAATGGGAAAAGCAACTCTATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCAAGGCTGCATCTGAAGGACGGTCTGTTCAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTTAGAAACAACAATTCAAGTGGATATTTGTTTCAGGAGAGAGAGAGGTATAAGCTGGGAAATCCGAAATCATTTCACTATCTAAATCAATCAAATTGTTATGAGCTGGCTGGTGTGAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCCGAGTTGTGGCTGCAATACTCCATCTTGGTAATGTTGACTTTGCAAAAGGAGAGGAGTCTGATTCATCATTTATAAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCAATGCATTAGAAGATGCTCTTTGCAAGCGCATGATGATTACACGGGAGGAAATCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACTGTTAGCAGGGATGGTTTAGCCAAGACAATATATTCTCGTTTGTTTGACTGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTCAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTTGATCTAATTGAGAAGGTTCAATTTTTTCTTCTTAACTATGCTCTTGGAGTTCAAAGATGCCACTCACAACTATCCCTCTCTGGCATAGCCTCTAATTCTTTGTGCCTTTGCAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGACAAAAATAAAGATTATGTGGTCGCTGAACATCAAGATTTGTTAATTGCTTCAAAATGTTCTTTTGTATCTGGCCTTTTCCCTCCTCCTGAGGAGGCGACCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGTTACAACTACAGCAGTTGATGGAAACATTAAATTCGACCGAACCCCATTATATAAGATGCGTGAAGCCCAATACTGTCCTACAACCTGCCATATTTGAGAATGCTACTGTTATGCAACAATTACGTCATGGAGGTGTTTTGGAGGCTGTTAGAATTAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTACGAAGAGATGGTAGCATGCAGGAAGATTCTAGAGAAGACAGGACTTGAAGGTTATCTGATAGGGAAATCAAAACTTTTCCTAAGAGGTAGTCTGATGGCCGAACTAGATGCACAAAGAACAAGAGTATATAGTGGAGCTGCCACAGTTATACAGAAGCGTATCAAATCTCGAATTGAACGTAAAAAGTACATTCGTATGCGAAGAAGTTGCACTCGTCTACAGTCATATTGGAGAGGTGTTCTTGCTCGAGAGTCATATGAAAGTAGGAGAAGAGAATCAGCTGCCCTCAAAATTCAAAGGAATAGTCTTGCATATATTGCCAGGAGCATCCATATTAAAACAAGGCTCGCTGTAATTGTTCTTCAGGCTGGTATACGAGCAATGGTTGCTCGGAGTGAATACAGACGTAGGAGGCAGGTTAACGCTGCTGCAATAGTTATTCAATCTTATTGGCGTCAGTATTTGAAGTCTAAGATGGTTAGAAATCCATCAACCGGTTCACAATGCGGATTGAACTCAAAAACTGCTGGTGAAGGTCTTAAGAAGCAAAGGATGGCTGACTCGGAAGAAACAGAGGAGGGTCTTAACTTGCCTGCGTTGCTCAACAGCAGGACAGATGCCATTGATGAAACAATTGAAATGATTGCCAAGGAAAACCGTGTTTCTCCAAAAGAAATAGAAGAAGCATACTTTATTATTAAAGAGCCCGGTAGTTCAGTTGAAGAAGCAGAATCTATGGTCACTCTCAGAGCAGAAGTGGCTAATCTAAGGTTTTCTTGCTCCTCGAATTCGAAAATGACTAAAGGTGGCAGAACACATTTACGCAAACAGGCCATGTTGCAGGCTGAAAGACACAGAGCTAATGAGTTTGAAAGGAAGTATATTGCAACGCTGAAAGTAAATGCAGAAGGATGTAGAAGACTAAAAGAAAACGAAAGGATGGTGCGTCAACTTCAGGACTGCATAAGCAGGATGATACATGGCTTGTCAAACCAAATCACGGAGATGAAAATGATCATGTGTACTCCTCCTAGGCCAGATGCATCTAGTTCTATTCCAAACAGGGTTCCGACGGATGCCACATCTAGTTGCTCTTATTCCTCGTCAGAAGACTTCACCTTTCCTGTTCCAAGATCTGACAATGATAGGGAAGGGGGATTCTCTGACTACTTCTAA | 2946 | 40.87 | MDNPVNIVVGSHIWVGDIESVWIDGLVLNIIGEDAEIQTSDGRQVVVKMSNLYPRDAEAPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDPCVMEQYKGAPVGELKPHVFAIADVAYRAMITNGKSNSILVSGESGAGKTETTKMLMCYLAFLGGKAASEGRSVQQQVLESNPVLEAFGNAKTVRNNNSSGYLFQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNVDFAKGEESDSSFIKDEESKFHLHMTAELLMCDPNALEDALCKRMMITREEIIKRSLDPLGATVSRDGLAKTIYSRLFDCFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKVQFFLLNYALGVQRCHSQLSLSGIASNSLCLCRNQVESLLFLMKLDKNKDYVVAEHQDLLIASKCSFVSGLFPPPEEATKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNTVLQPAIFENATVMQQLRHGGVLEAVRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEMVACRKILEKTGLEGYLIGKSKLFLRGSLMAELDAQRTRVYSGAATVIQKRIKSRIERKKYIRMRRSCTRLQSYWRGVLARESYESRRRESAALKIQRNSLAYIARSIHIKTRLAVIVLQAGIRAMVARSEYRRRRQVNAAAIVIQSYWRQYLKSKMVRNPSTGSQCGLNSKTAGEGLKKQRMADSEETEEGLNLPALLNSRTDAIDETIEMIAKENRVSPKEIEEAYFIIKEPGSSVEEAESMVTLRAEVANLRFSCSSNSKMTKGGRTHLRKQAMLQAERHRANEFERKYIATLKVNAEGCRRLKENERMVRQLQDCISRMIHGLSNQITEMKMIMCTPPRPDASSSIPNRVPTDATSSCSYSSSEDFTFPVPRSDNDREGGFSDYF | 981 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 9324251 | 9343386 | + | Cp4.1LG12g10670.1 | Cpe12g01135 | 479132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g01135 | 981 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | PANTHER | MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN | 6 | 214 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN | 6 | 214 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN | 219 | 363 | - | - | |
Cpe12g01135 | 981 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 681 | IPR027417 | - | |
Cpe12g01135 | 981 | MobiDBLite | consensus disorder prediction | 937 | 965 | - | - | |
Cpe12g01135 | 981 | Gene3D | Kinesin motor domain | 522 | 560 | IPR036961 | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN | 219 | 363 | - | - | |
Cpe12g01135 | 981 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | ProSiteProfiles | IQ motif profile. | 633 | 662 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | MobiDBLite | consensus disorder prediction | 935 | 981 | - | - | |
Cpe12g01135 | 981 | ProSiteProfiles | IQ motif profile. | 704 | 733 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | Gene3D | - | 634 | 686 | - | - | |
Cpe12g01135 | 981 | Gene3D | - | 364 | 439 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN | 363 | 418 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN | 461 | 941 | - | - | |
Cpe12g01135 | 981 | SMART | MYSc_2a | 56 | 631 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | MobiDBLite | consensus disorder prediction | 966 | 981 | - | - | |
Cpe12g01135 | 981 | Gene3D | - | 216 | 261 | - | - | |
Cpe12g01135 | 981 | Pfam | IQ calmodulin-binding motif | 707 | 725 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | Pfam | IQ calmodulin-binding motif | 732 | 745 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | Pfam | IQ calmodulin-binding motif | 657 | 676 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 684 | 750 | IPR027417 | - | |
Cpe12g01135 | 981 | Gene3D | Kinesin motor domain | 12 | 215 | IPR036961 | - | |
Cpe12g01135 | 981 | Pfam | Myosin head (motor domain) | 363 | 417 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | Pfam | Myosin head (motor domain) | 461 | 618 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | Pfam | Myosin head (motor domain) | 65 | 214 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | Pfam | Myosin head (motor domain) | 218 | 362 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | ProSiteProfiles | IQ motif profile. | 656 | 685 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | ProSiteProfiles | Myosin motor domain profile. | 62 | 630 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cpe12g01135 | 981 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 262 | 363 | - | - | |
Cpe12g01135 | 981 | Gene3D | - | 704 | 749 | - | - | |
Cpe12g01135 | 981 | Gene3D | - | 564 | 631 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN | 363 | 418 | - | - | |
Cpe12g01135 | 981 | PANTHER | MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN | 461 | 941 | - | - | |
Cpe12g01135 | 981 | Gene3D | - | 461 | 521 | - | - | |
Cpe12g01135 | 981 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 467 | 499 | - | - | |
Cpe12g01135 | 981 | SMART | iq_5 | 655 | 677 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | SMART | iq_5 | 632 | 654 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | SMART | iq_5 | 729 | 751 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | SMART | iq_5 | 703 | 725 | IPR000048 | GO:0005515 | |
Cpe12g01135 | 981 | SMART | iq_5 | 680 | 702 | IPR000048 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe12g01135 | Cpe-Chr12:9324251 | Cpe18g00337 | Cpe-Chr18:4819598 | 0 | dispersed | |
Cpe12g01135 | Cpe-Chr12:9324251 | Cpe13g01088 | Cpe-Chr13:8773062 | 5.22E-113 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g01135 | K10357 | - | csv:101220626 | 1410.97 |