Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00024 ATGAGGACTGGAAACCGGAAGAGGAAGCTGCGGCTAAGCAAGATCTACTCATTTGCCTGTGGAAAATCATCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCGGATTGTTTGGAGGCTGGAATGTGTAATTATGTTAACAACTCCATCAGCTCTACAAAGTATACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGAATATTAGCCTTCACCCCTCTTGCTCCTTATAGTGCTGATATTGAGGTCAATAATAGAAAGGTTAAGGTTCATCAAGGTGGTGGAGTCTTTGATTATACTGAATGGAAATCTTTGCGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCAGACCTTCTGTTGATTTCATCCTGCTATGAGGATGGATTCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCCTTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTCTATACCTTCGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGATTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCAAAAAGAAGCAAGGTTGAGAAGAAGATGGATAAAATCATATATCTGTTATTAGGCATTCTATTTGTGCTGGCATTTCTTGGATCTATAGTCTTTGGCGTCATGACTAAGGATGATCTGAAAAATGGGAGGTCAAAGAGATGGTATCTTCGACCAGATGACTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACGGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTACTATGAAGAAGGTGACAAACCAGCACACGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGCACTTTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTGTCACTGAAACTGAGAGAGCTATGGAAGGTAGAAATGGTATGCCAGTGCTTAATGGCAGTGGCAATGGAAATGTCTATAAGCACAATGAGAATGCTACAGATACAAATCCCCCTGTCAAAGGCTTTAATTTTAAGGACAGAAGGATTATGAACGGAAACTGGGTTAAGGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTCGATGAAAACACGGGAAAGATTTCATATGAAGCTGAATCACCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAGTTGGTTTTGAATTCTACCAGAGGACACAGACAAGTGTATCAGTTCGTGAATTGGATCCTAGGTCTGGAAGTAAGGTCGAAAGGACATACAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCCCGGAAGAGAATGTCTGTCATAATAAGAGATGAAGATGGAAAAGTACTATTGCTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGCAGATTTGAAGAGAAAACGAAGGAGCATATCAATGAGTATGCTGATGCAGGCTTACGGACATTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAGTCATTGATTGATAAAGTAACTGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGCGACAAGATGGAGACTGCGATCAATATTGGTTTTGCATGTAGTTTGCTTCGTCAAGGGATGAAACAGATTATTATAACTCTGGAAACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGTATCAAAAGAAAGCATCGTGCACAAGATCACTCGGGCAAGGTCTCAGCTCACTGCCTCAAGTGGAAGTTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAGGATGATGTGAAAAATGCATTCCTTGAGCTTGCCATTGGATGTGCGTCTGTTATTTGCTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACCAAGTTGGTTAAACTTACAACGGGAAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGTCATGTCGAGTGATATAGCAATCGCTCAGTTCAGATATTTGGAGCGTCTACTCCTCGTTCATGGACATTGGTGTTACAGGAGATTATCGTCAATGATATGCTACTTTTTTTACAAGAACTTCACATTTGGTTTTACGATTTTCTTATATGAGGCATACACTTCGTTCTCTGCACAACCTGCATATAACGACTGGTTTATGTCTCTCTACAATGTCGTGTTCTCCGCTCTGCCCGTTGTGGCTCTCGGGGTGTTTGACCAAGACGTATCTGCAAGATACTGCCTTAAGTTTCCTATGTTGTACCAACAAGGTGTGCAGAACGTCCTCTTCAGCTGGCGTCGGATAATCGGCTGGATGTTTAATGGTCTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAGTGGAATGCAGCATCAAGCATTTAACCCCGAGGGGAAGACCGTAGGGAGGGATATTCTCGGGGCGACGATGCTGTCGTGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACAATGTTACAAGTTATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATATGGAGCCTTCCCTGCCAGCATTTCGACAAATGCATATCGCGTGTTCCTCGAAGCCCTTGCTCCTGCAGGGTCTTATTGGGTTCTGCTGATATTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTGCAGATGAATTTCTTCCCCATGTACCATGAAAAAATACAGTGGATAAGGCACGATGGTCAGGGTCAGATAGATGATCCCGAGTTTGTCAATATGGTCAGGCAAAGCTCGATAAGACCGAGTACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGAAAAACCATATAAATTTTGGCAGAAAAACAGCAGGAAATGA 3501 41.87 MRTGNRKRKLRLSKIYSFACGKSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMCNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYSADIEVNNRKVKVHQGGGVFDYTEWKSLRVGDIVKVEKDQYFPADLLLISSCYEDGFCYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLGILFVLAFLGSIVFGVMTKDDLKNGRSKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEGDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPVLNGSGNGNVYKHNENATDTNPPVKGFNFKDRRIMNGNWVKEPHADVIQKFFRLLATCHTAIPDVDENTGKISYEAESPDEAAFVIAAREVGFEFYQRTQTSVSVRELDPRSGSKVERTYKLLNVLEFNSARKRMSVIIRDEDGKVLLLCKGADSVMFERLAKNASRFEEKTKEHINEYADAGLRTLVLAYRELDEEEYKEFDRKFYEAKNSVSAERESLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKVSKESIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNAFLELAIGCASVICCRSSPKQKAMVTKLVKLTTGKTTLAIGDGANDVGMLQEADIVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTIFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWRRIIGWMFNGLCSALIIFFFCTSGMQHQAFNPEGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTMLQVIFIWASIFIWYLFLMIYGAFPASISTNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQMNFFPMYHEKIQWIRHDGQGQIDDPEFVNMVRQSSIRPSTVGFTARLAAKIRREKPYKFWQKNSRK 1166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 204020 211324 - Cp4.1LG13g00310.1 Cpe13g00024 479222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00024 1166 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 474 676 IPR023299 GO:0000166
Cpe13g00024 1166 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 805 911 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe13g00024 1166 Gene3D - 104 260 - -
Cpe13g00024 1166 SUPERFAMILY Calcium ATPase, transduction domain A 113 257 IPR008250 -
Cpe13g00024 1166 Pfam Phospholipid-translocating ATPase N-terminal 42 103 IPR032631 -
Cpe13g00024 1166 CDD P-type_ATPase_APLT_Dnf-like 59 987 - -
Cpe13g00024 1166 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Cpe13g00024 1166 PRINTS P-type cation-transporting ATPase superfamily signature 839 858 - -
Cpe13g00024 1166 Gene3D - 671 865 IPR023214 -
Cpe13g00024 1166 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 105 - -
Cpe13g00024 1166 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 105 - -
Cpe13g00024 1166 SUPERFAMILY HAD-like 393 882 IPR036412 -
Cpe13g00024 1166 SFLD p-type atpase 380 878 IPR044492 -
Cpe13g00024 1166 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Cpe13g00024 1166 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 105 1153 - -
Cpe13g00024 1166 Pfam Cation transport ATPase (P-type) 511 601 - -
Cpe13g00024 1166 Gene3D - 521 649 IPR023299 GO:0000166
Cpe13g00024 1166 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1104 IPR023298 -
Cpe13g00024 1166 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 105 1112 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe13g00024 1166 Pfam Phospholipid-translocating P-type ATPase C-terminal 855 1105 IPR032630 -
Cpe13g00024 1166 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 105 1153 - -
Cpe13g00024 1166 SFLD C1.7: P-type atpase like 380 878 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01379 Cpe13g00024 CCT
Cpe09g00258 Cpe13g00024 CCT
Cpe01g01379 Cpe13g00024 ECH
Cpe09g00258 Cpe13g00024 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00024 Cpe-Chr13:204020 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g00880 Cpe-Chr1:5169306 Cpe13g00024 Cpe-Chr13:204020 0 transposed
Cpe01g01379 Cpe-Chr1:8291914 Cpe13g00024 Cpe-Chr13:204020 0 wgd
Cpe13g00024 Cpe-Chr13:204020 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00024 K01530 - csv:101205800 2145.55