Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00064 ATGTCCGAACCACCTCCTTCCGATCATGATTCATCCTCCTCTGTCGCCAAGCTCCGCAAGATCCCCGCCATTCCTCTTCTCCGCGATTCCATATCCAATGCCGGAGACTCCGATTCCGATGAAGAATATGACCTTGACGAGGATTTTCCTTATGAACCTGACGATTCCTCCATCATTATGGCCTCCTCTCTCGGTTTGAACCACATTCGGACGCGGTCTGGTCCTTTGCCGCAACGGACCTTGGCCGCTGGCATGCCCTCCGATTTGGGAGAAACTTCCAGGACTAATGCCACCGCTGGGATCGAGTCCGAGCCAAAACATTCCTCCACTGATCATGGGAAAAAAGTTCTGTGGAGTCAATCGAAATCGTTTAGATATCCAACAGCTCTGAATCATGATTTTGAGGTTAATCATGTAGCGTTTGGAAAGGAAATTCAGTCTCCACGATTCCGTGCCATACTGCGTGTTACTAGTGGAAAAAAGAAGAGAACTCTGGATATCAAAAGCTTCTCTCACGAGCTTAATTCCAAGGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCCTTTGGATATCTGGAAGAGATCATGGTGGCTATCAGAGCCAAATTTGACAGATTGAAAGATGATGTTAATTACGAACTGGGCATTTTTGCTGGAGATCTGGTGGATACACTTGAAAAGACAGACCGGTCTCTGCCTGAAATAAGAGAAGGTTTGGAGGACCTATTGGTGGTTGCTCGGAAATGTGCAACAATGTCACCTACTGATTTTTGGGCGAAAGGTGAAGGGATTGTCCAAAATCTAGACGACCGGCGGCAGGAGCTGCCATTAGGGGTTCTTAAGCAAGCCCATACCCGCCTTCTTTTCATCTTGACACGATGTACTAGGCTTATTCAGTTTAGAAAGGAAAGTGGTTATGAAAATGAGCACATTTTGGGTCTTCATCAACTTAATGATCCAGGAATTTATCCAGAGAAAATTAGGAAGCTCGAACAACTCGACGTTGGCGATCCATTGACTACGAAAGAAGATATTGAGCAGCAGCTGAAGTTGGTTGGGAAGGATCAAGCCAGTCGCATGGTGAAGCACCATTCAGGTCCAAGTTTTAGTAGTAGTGCTGGAAATGTTGATCTGGACTCTGCGATAAGTATTGACTCATCTACAAGCACATATAGGATGTCATCCTGGAAAAAGCTACCATCAGCAGTTGCCAAGAACCGGAAAGACTCTGACTCTACTGGAACACCTTCTAAGGATAAACTTGAAATGTTGCATGTACATGAAGCTAAGACTGGGAGCATCAATCAATTAGATACCCCATCTATTCCTATTGCGCATTCTGAAGCTCCTCCTAAAGAACAAAAATTATCTTGGGGAATATGGGGTTATCAAAATGCTACTTTTGAGAATCTGATGATTTGTCGGATTTGTGAGGTTGAAATTCCTACCATTCATGTTGAGGAGCATTCTCGAATATGTACGATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAACGAGCGCCTTGCACGGGTTGCTACAGCTCTTGAAAAAATACTAGAGTCTTGGACGCCTAAAAGTACACCGAGAAGTAGCAATGTTTCCTGTGGAAATTTTGATACTGTTAAGGTTTCTACATCAAGTATGCAAGAAGATTTTTTTGAGTTATCATCTAAAGGAATCAATTTGTATTGTCAAAACTCAGAGGATTTGCTTGATTCCCTCCCTGTTACTGGCAACTCTTTTTGTATGGAAAGTCAGGATACTTTTCCTGATCCATCATACAATCGACCATTTAATTTCACACCAGAACACAGTACAAAATCAATGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAGTTGGCGTTGCATGGGCGAAGAACAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAACGTTAACAACTCTGGCTATGGTGCATTGGAGTCTATGCTTGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCTCTTGTCGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGAATCGTCGATGAAGAGAGTTCAGTGGAAGATGATGCTGTTCGTAGTTTACGTGCAAGTCCTGTTAACACATGTTCAAAAGATCGAACATCAATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGTGCATATGGTCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCTGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATTTGTATCTGGTCATGGAATACTTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGAATTTATATCGCTGAAATTGTTCTTGCTTTGGAATATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTAACAGATTTTGGGCTCTCCAAGATTGGTCTTATCGATAGTACAGATGATTTCACAGGTCCATCAATCAATGGAACTGCTTCACTTGGAGACAATGGTCCAACATCTCAATCTTTGTCAAAAAGAGAACACAGACAAAAGCATTCAGTAGTTGGTACTCCAGACTATTTGGCCCCTGAGATACTTCTAGGCATGGGACACGGTGTAACTGCTGATTGGTGGTCTGTTGGTGTAATCCTTTTCGAGATGCTTGTAGGATTACCGCCGTTCAATGCAGAAAGTCCACAGCAAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGATACCAGACGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATTCTGTTCAAAGACTGGGAGCTACCGGAGCCGGAGAGGTCAAGCGGCATCTTTTCTTCAAAGATATTAACTGGGATACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGTTATGTATGGAATCCAGAAGATGAGGATTTTAACTGTGGAAGTGACTTTGATGATCGTGATTTGACAGATACTTGCAGCAGTAGTTCACTTAGTAACCAACAAGATGAAGATGGAGACGAATGTGGCAGTTTGGCTGACTTCGGTACATCATCAGCCCTTTCTGTGAAGTATTCGTTCAGCAATTTCTCTTTCAAG 3432 42.05 MSEPPPSDHDSSSSVAKLRKIPAIPLLRDSISNAGDSDSDEEYDLDEDFPYEPDDSSIIMASSLGLNHIRTRSGPLPQRTLAAGMPSDLGETSRTNATAGIESEPKHSSTDHGKKVLWSQSKSFRYPTALNHDFEVNHVAFGKEIQSPRFRAILRVTSGKKKRTLDIKSFSHELNSKGVRPFPVWKPRAFGYLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDTLEKTDRSLPEIREGLEDLLVVARKCATMSPTDFWAKGEGIVQNLDDRRQELPLGVLKQAHTRLLFILTRCTRLIQFRKESGYENEHILGLHQLNDPGIYPEKIRKLEQLDVGDPLTTKEDIEQQLKLVGKDQASRMVKHHSGPSFSSSAGNVDLDSAISIDSSTSTYRMSSWKKLPSAVAKNRKDSDSTGTPSKDKLEMLHVHEAKTGSINQLDTPSIPIAHSEAPPKEQKLSWGIWGYQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLARVATALEKILESWTPKSTPRSSNVSCGNFDTVKVSTSSMQEDFFELSSKGINLYCQNSEDLLDSLPVTGNSFCMESQDTFPDPSYNRPFNFTPEHSTKSMSAGTLTPRSPLLTPRSSQIELALHGRRTISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGIVDEESSVEDDAVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLIDSTDDFTGPSINGTASLGDNGPTSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQQIFDNIINRDIPWPKIPDEMSYEAHDLIDKLLTENSVQRLGATGAGEVKRHLFFKDINWDTLARQKAMFIPSAEPQDTSYFMSRYVWNPEDEDFNCGSDFDDRDLTDTCSSSSLSNQQDEDGDECGSLADFGTSSALSVKYSFSNFSFK 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 499080 507499 - Cp4.1LG13g00900.1 Cpe13g00064 479262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00064 1144 ProSiteProfiles AGC-kinase C-terminal domain profile. 1050 1144 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cpe13g00064 1144 CDD STKc_MAST_like 767 1054 - -
Cpe13g00064 1144 MobiDBLite consensus disorder prediction 922 946 - -
Cpe13g00064 1144 MobiDBLite consensus disorder prediction 922 936 - -
Cpe13g00064 1144 Pfam Protein kinase domain 761 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00064 1144 MobiDBLite consensus disorder prediction 89 104 - -
Cpe13g00064 1144 ProSiteProfiles Protein kinase domain profile. 761 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00064 1144 Gene3D Transferase(Phosphotransferase) domain 1 845 1067 - -
Cpe13g00064 1144 MobiDBLite consensus disorder prediction 70 113 - -
Cpe13g00064 1144 SMART serkin_6 761 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00064 1144 MobiDBLite consensus disorder prediction 26 46 - -
Cpe13g00064 1144 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 1144 - -
Cpe13g00064 1144 SUPERFAMILY Protein kinase-like (PK-like) 758 1079 IPR011009 -
Cpe13g00064 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Cpe13g00064 1144 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 13 1144 - -
Cpe13g00064 1144 Gene3D Phosphorylase Kinase; domain 1 759 1076 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00706 Cpe13g00064 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01529 Cpe-Chr4:12024924 Cpe13g00064 Cpe-Chr13:499080 1.60E-68 dispersed
Cpe13g00064 Cpe-Chr13:499080 Cpe17g00198 Cpe-Chr17:1277546 2.29E-85 dispersed
Cpe02g01104 Cpe-Chr2:10092720 Cpe13g00064 Cpe-Chr13:499080 0 transposed
Cpe03g01392 Cpe-Chr3:11203371 Cpe13g00064 Cpe-Chr13:499080 2.87E-35 transposed
Cpe13g00064 Cpe-Chr13:499080 Cpe05g00706 Cpe-Chr5:4326768 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62773 PF00069 Pkinase 4.40E-62 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00064 - - csv:101210442 1893.63