Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00085 ATGCCTTTCTCCAAAGCTTTAGCCTATATTCTCGTCGCCACGGCCCTGATCGTTGCTGGACCGACAACGGCGCAGCTGAGCCCGACGTTCTACGACGCGAGATGCCCGAATTTATCCTCCATTGTCGAAGATGTCGTGAGACAAGCTCTCCTAACCGATGCCCGAGCAGGCGCCAAACTCATTCGCTTCCATTTCCACGACTGCTTTGTTAATGGATGTGACGGGTCGGTTCTACTAATAGATTCCGTTGAAGACAACATCGATAGTGAACAAAACGCAGCGGGAAACCAAGGGATACAAGGCGAAAATATCGTCAATGATATCAAAACTGCCGTTGAAAATGCATGCCCGAATCTCGTCTCGTGTGCTGACATCTTAGCTATTGCGTCGAATTCAGCTGTTGTTTTGGCTGGAGGAAGAGGGTGGGAGGTTCAGCTGGGAAGAAGAGACAGTAGAGAAGCAAATAGATCTGGAGCTGTAAGCAACCTTCCCAGTCCTTTTGAACCTCTTGCAAATCTCACCGTCAAATTCGCCAACGTCGGTCTCAATTCCACCGACCTCGTTGCTTTATCGGGTACGCGATTAACCAACTTTAGCGGGTCGGGGCTTCCCGATCCGACTCTAGAGGCAGCCTACCGGGAGACCCTGATCGAGGCATGTCCTGCAGGCGGCGACAACAACCGGATCGACCTGGATCCGACGACTCCAGACGAATTCGACAAGAACTATTTCACGAATCTCCAAGCCAACCGGGGGCTTCTCACCAGCGACCAGGTGCTGTTCTCCACCGACGGCGCCGACACCATCGAGATTGTGAACCGGTTTGCGGCCAGCCAAGAAGCGTTCTTTGATGGGTTTGGAGCGTCCATGATCAAGATGGGGAATATTCGGCCGTTGACTGGAACTGATGGGGAGATTCGTTTGACTTGTACTCGGGTCAATCCTTTGCCGGCTGTGGCAGAT 963 52.44 MPFSKALAYILVATALIVAGPTTAQLSPTFYDARCPNLSSIVEDVVRQALLTDARAGAKLIRFHFHDCFVNGCDGSVLLIDSVEDNIDSEQNAAGNQGIQGENIVNDIKTAVENACPNLVSCADILAIASNSAVVLAGGRGWEVQLGRRDSREANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVALSGTRLTNFSGSGLPDPTLEAAYRETLIEACPAGGDNNRIDLDPTTPDEFDKNYFTNLQANRGLLTSDQVLFSTDGADTIEIVNRFAASQEAFFDGFGASMIKMGNIRPLTGTDGEIRLTCTRVNPLPAVAD 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 638162 640068 - Cp4.1LG13g00920.1 Cpe13g00085 479283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00085 321 ProSiteProfiles Plant heme peroxidase family profile. 25 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 Gene3D Peroxidase, domain 2 164 293 - -
Cpe13g00085 321 PANTHER PEROXIDASE 58 17 314 - -
Cpe13g00085 321 CDD secretory_peroxidase 25 313 IPR033905 GO:0004601|GO:0042744
Cpe13g00085 321 SUPERFAMILY Heme-dependent peroxidases 25 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 PANTHER PEROXIDASE 72-RELATED 17 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 Pfam Peroxidase 42 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe13g00085 321 Gene3D - 30 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00521 Cpe-Chr5:3108291 Cpe13g00085 Cpe-Chr13:638162 1.07E-90 dispersed
Cpe13g00085 Cpe-Chr13:638162 Cpe16g00910 Cpe-Chr16:8463225 8.40E-07 dispersed
Cpe13g00085 Cpe-Chr13:638162 Cpe05g00520 Cpe-Chr5:3087971 1.46E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00085 K00430 - csv:101215530 512.301