Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00125 ATGGAAGCTCTGTGGATTATCAGCTTCGTTTTGGTTCTGGGGTTGGTTTTTTCCCCAAGTAATGGCGACCCAGTTCAAGATAAGCGAGCTTTGCTTGATTTTGTCAAGAAGCTTCCTCACTCTCGCTCTCTTAATTGGAATGTGACTTCTCCGGTTTGCCATTACTGGACTGGTATAACTTGCAGTGATGATGAATCTCGTGTTATAGCCGTTCGATTGCCCGGAGTTGGCTTCCACGGCCCGATTCCGGCGAACACTCTCAGCCGGCTCACGGGGCTGCAAATTTTGAGTCTCAGATCCAATCGTATAACAGGGGATTTCCCTTCGGATTTCTCTAATCTTAGTAACTTGTCTTATCTTTATCTTCAGTTCAATGACTTCTCTGGGCCATTGCCTTCAAACTTCTCTGTCTGGAAGAATCTCACCTTTGTGAACCTCTCTAACAATGGCTTCAATGGCAGCATACCCTTTTCACTTTCTAATATGACAGAGCTTACTGGTTTGAATTTGGCAAACAACTCTCTCTCAGGGGAAATCCCTGACCTCCAAATGCCCAAATTGCAGATTCTGAATTTATCCAACAACAATTTGAGTGGGAGTTTGCCTAAATCTTTACAGAGATTTCCAAGTTCTTCATTTCTAGGCAATAACATATCCTTCGAACGTTCTTCACCGAACAATCCTCCCGTGCCACCGATGTTGCTCGTGTCAAATGATAAGCCGAAGAATTCTAAAGGGCTTAGAGAAGCAGCATTGTTAGGAATCATAATTGCTGGTGGTCTTTTGGGGCTTCTGGCTTTTGGCTTTCTAATACTTGTTTGCTTCTCGAGAAGGAAGAGTGAGGACGACGAGTATTCCGGGGATCGGCAGAAAGGTCGAATGTCACCGGAGAAGGTGATATCGAGGACTCAAGATGCGAATAACAGATTGGTTTTCTTTGAGGGCTGTCATTATGCTTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTTTTGGGGAAGGGAACTTTTGGGACTGCTTATAAAGCAATTCTGGAGGATGCTACTACTGTTGTTGTTAAGAGGTTGAAGGATGTTAACGCCGGGAAGCGCGATTTCGAGCAGCAAATGGAGATCGTTGGCGGTATCAGGCATGAGAATGTGGTTGAGTTGAAGGCTTACTATTATTCCAAAGATGAGAAGCTGATGGTTTATGATTTCTTTAGTCAGGGAAGCGTCTCGGCTATGTTGCACGGTAAACGTGGAGAGGAAAAGACCCCATTAGATTGGGACAGTAGACTGAGAATTGCAGTAGGTGCAGCACGAGGAATCGCACGTGTCCATGCCGAAAACGGAGGGAAGCTCGTCCATGGAAATGTAAAATCCTCGAACATCTTTCTGAACTCTCGACAGTACGGATGTGTGTCTGATCTTGGACTAGCAACCATAACAAGCTCACTCGCTCCACCTATATCTCGTGCTGCTGGTTACCGAGCCCCGGAAGTGACAGACACCCGCAAGGCCACACAGACATCAGATGTTTTCAGCTTCGGCGTCGTGCTTCTCGAGCTTCTAACCGGAAAGTCCCCGATACACGCCACAGGAGGCGAAGAAATCGTGCACTTGGTTAGATGGGTTCATTCAGTTGTCCGTGAGGAGTGGACAGCTGAGGTATTTGATGTAGAGCTGATGAGGTACCCCAACATAGAGGAAGAAATGGTTGAAATGTTACAGATAGCCTTATCATGTGTAACCAGGATACCAGATCAGAGACCGAAAATGTCGGAAATCGTGACGATGATCGAAAGCGTTCGACCAATGGAAGCAGAGAATCGACGTTCTTCCACGAACCGATCTGAAAGTTCAATACCGCCGCCGCCGCCGCCACAAGCTGTCGTGACAGAGAATTCAACCTCTCAGTGA 1905 46.56 MEALWIISFVLVLGLVFSPSNGDPVQDKRALLDFVKKLPHSRSLNWNVTSPVCHYWTGITCSDDESRVIAVRLPGVGFHGPIPANTLSRLTGLQILSLRSNRITGDFPSDFSNLSNLSYLYLQFNDFSGPLPSNFSVWKNLTFVNLSNNGFNGSIPFSLSNMTELTGLNLANNSLSGEIPDLQMPKLQILNLSNNNLSGSLPKSLQRFPSSSFLGNNISFERSSPNNPPVPPMLLVSNDKPKNSKGLREAALLGIIIAGGLLGLLAFGFLILVCFSRRKSEDDEYSGDRQKGRMSPEKVISRTQDANNRLVFFEGCHYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKDVNAGKRDFEQQMEIVGGIRHENVVELKAYYYSKDEKLMVYDFFSQGSVSAMLHGKRGEEKTPLDWDSRLRIAVGAARGIARVHAENGGKLVHGNVKSSNIFLNSRQYGCVSDLGLATITSSLAPPISRAAGYRAPEVTDTRKATQTSDVFSFGVVLLELLTGKSPIHATGGEEIVHLVRWVHSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIALSCVTRIPDQRPKMSEIVTMIESVRPMEAENRRSSTNRSESSIPPPPPPQAVVTENSTSQ 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 876777 880507 - Cp4.1LG13g01150.1 Cpe13g00125 479323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00125 634 MobiDBLite consensus disorder prediction 597 634 - -
Cpe13g00125 634 Gene3D Ribonuclease Inhibitor 25 232 IPR032675 -
Cpe13g00125 634 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515
Cpe13g00125 634 PANTHER OS05G0588300 PROTEIN 21 608 - -
Cpe13g00125 634 Gene3D Transferase(Phosphotransferase) domain 1 402 617 - -
Cpe13g00125 634 PANTHER PROTEIN, PUTATIVE-RELATED 21 608 - -
Cpe13g00125 634 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Cpe13g00125 634 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Cpe13g00125 634 SUPERFAMILY L domain-like 37 210 - -
Cpe13g00125 634 Pfam Protein tyrosine and serine/threonine kinase 331 594 IPR001245 GO:0004672|GO:0006468
Cpe13g00125 634 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515
Cpe13g00125 634 Gene3D Phosphorylase Kinase; domain 1 294 401 - -
Cpe13g00125 634 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00125 634 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00620 Cpe13g00125 CCT
Cpe05g00620 Cpe13g00125 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00620 Cpe-Chr5:3765216 Cpe13g00125 Cpe-Chr13:876777 0 dispersed
Cpe13g00125 Cpe-Chr13:876777 Cpe16g00693 Cpe-Chr16:7154115 0 dispersed
Cpe13g00125 Cpe-Chr13:876777 Cpe14g00065 Cpe-Chr14:361080 4.35E-72 wgd
Cpe13g00125 Cpe-Chr13:876777 Cpe05g00371 Cpe-Chr5:2111525 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62779 PF07714 PK_Tyr_Ser-Thr 6.70E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00125 - - cpep:111808460 1176.77