Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00137 ATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGATGGTGAAGAAGAAAAGTGGCGCGAGTGAAGTTGAAATGGTTAGGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGNAGTGAGTGAAGTTGAAATGGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCAGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGGTGGAGATTTTCCAGTTTTGGAAATGTTTGGTACTTTTGCACTATCTGTTGGAGCTGCTGTGGGGATGGAATTTTGGGCTAGATGGGCACATAAACAACTGTGGCATGATACGCTATGGAATATGCACAAGTCTCATCACAGGGCGAGGGATGGACCGTTTGAATTGAACGATGTGTTTGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTCCCCGGTCTATGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAA 963 49.12 MATGISAVATAAPYRRLIQRPAKAPPPANRVPWRCFAKQSTRRLSMVKKKSGASEVEMVRDLKVIVEEKMGRKKAERDAYLVAAIVSSFXVSEVEMVKDLKVIVEEKMGRKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQLKGGDFPVLEMFGTFALSVGAAVGMEFWARWAHKQLWHDTLWNMHKSHHRARDGPFELNDVFAIINAVPAIALLSFGFFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEDVDGEEELQKEIKKRSKVYRN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 994536 997442 + Cp4.1LG13g01380.1 Cpe13g00137 479335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00137 320 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 99 316 - -
Cpe13g00137 320 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 9 92 IPR045019 GO:0016491
Cpe13g00137 320 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 99 316 IPR045019 GO:0016491
Cpe13g00137 320 Pfam Fatty acid hydroxylase 165 292 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cpe13g00137 320 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 9 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00137 Cpe-Chr13:994536 Cpe14g00086 Cpe-Chr14:468453 2.12E-116 wgd
Cpe13g00137 Cpe-Chr13:994536 Cpe09g00069 Cpe-Chr9:405399 4.88E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00137 K15746 - csv:101214325 444.506