Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00150 ATGGATGCGGCGGCGCTGGCGGCGGCGTTTGGCGGCGCGGTGGTGGCGTACTTTATTTGGTTCTTGAATATCCGACGGTCCTTGAGTGGGCCACGTGTTTGGCCGCTATTGGGCAGTCTTCCTGGGCTGATTAAGAATGGTCATCGAATGCATGACTGGATTGCAGAGAATCTCCGGTCGACTGGCGGCACGTACCAGACTTGCACGTGTGCCATTCCGTTTTTGGCTAAGAAGCAAGGTCTCGTGACGGTCACGTGCGACTCGAAGAATCTTAAGCATATTTTAAAAACTCGGTTCGAGAATTACCCGAAAGGGCCGAATTGGCAAGCTGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCAGATGGTGACACGTGGTTGTTCCAGCGTAAAACTGCTGCACTGGAATTTACCACTAGGACTCTCCGCCAAGCCATGGCTCGTTGGGTTAGCCGAGCTATTAAGAATCGGTTTTGTCCAATTCTTGAGTCGGCTCAACGTCATGCTAAGCCGGTTGATCTACAGGACCTTTTGCTTCGGCTTACGTTCGATAATATTTGTGGGTTGACTTTTGGTAAGGATCCACAAACTCTTGCGCTTGAATTGCCTGAAAACGGCTTTGCGCTAGCTTTCGATCGAGCCACTGAAGCGACATTGTGTCGATTTATTTTGCCTGGCTTTATCTGGAAGCTAAAAAAATGGCTCCGGCTCGGGATGGAGGTCACCTTAACCCAAAGCCTCGAGGACACAAATCAATACTTGACAAATATCATCAAGACACGTAAGCTCGAGCTGTCCAGTCAGCACCATGTCGACAATAGTGGGACACCTCACGACGACTTGCTGTCAAGGTTTATGAAAAAGAAGGAATCCTACTCAGACGAATTCCTCCAACACGTGGTGCTTAACTTCATCCTAGCTGGACGAGACACGTCATCGGTCGCACTGAGCTGGTTCTTTTGGTTGGTCAGTCAAAACCCAAGAGTGGAGGAAAAAATCCTCATCGAAATATGCACCGTTCTGATGGAGACACGTGGCGAAGATATATCCACGTGGGTTGAAGAGCCGTTGGGATTTGAAGAAGTGGATAAATTGATTTACCTGAAAGCTGCCTTGTCGGAAACTCTTCGACTTTACCCATCGGTGCCGGAAGATTCAAAACATGTGATAAACGACGACGTTTTACCCACCGGAACTTTCGTCCCCGCCGGCTCCTCTGTTACGTATTCAATATACTCAATTGGTCGGATGAAATTCATATGGGGGGAAGATTGTTTAGAATTCAAGCCAGAGAGATGGCTGTTGGGGTCAGATAACGACAAAATTGAGCTTCAAAATACTTATAAATTCATTGCTTTTAATGCCGGACCAAGAATATGCTTGGGGAAAGATTTGGCCTACTTGCAAATGAAGTCGATTGCGGCCGCGGTGTTGCTCCGCCACCGCCTGACAGTGGTTGCCGGCCACCGTGTCGAGCAGAAGATGTCGCTGACATTGTTCATGAAGTATGGACTTAAAGTTCAATTGCAACCCAGAGATTTGGGGCATGTGGCGGAGAAGATTAGACAGACAGCGGCGGAGACGGTGGCGACGGCGGAAAATATGGCTGTCTTGTTGTAA 1626 48.4 MDAAALAAAFGGAVVAYFIWFLNIRRSLSGPRVWPLLGSLPGLIKNGHRMHDWIAENLRSTGGTYQTCTCAIPFLAKKQGLVTVTCDSKNLKHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKNRFCPILESAQRHAKPVDLQDLLLRLTFDNICGLTFGKDPQTLALELPENGFALAFDRATEATLCRFILPGFIWKLKKWLRLGMEVTLTQSLEDTNQYLTNIIKTRKLELSSQHHVDNSGTPHDDLLSRFMKKKESYSDEFLQHVVLNFILAGRDTSSVALSWFFWLVSQNPRVEEKILIEICTVLMETRGEDISTWVEEPLGFEEVDKLIYLKAALSETLRLYPSVPEDSKHVINDDVLPTGTFVPAGSSVTYSIYSIGRMKFIWGEDCLEFKPERWLLGSDNDKIELQNTYKFIAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVAGHRVEQKMSLTLFMKYGLKVQLQPRDLGHVAEKIRQTAAETVATAENMAVLL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1093759 1095384 + Cp4.1LG13g01490.1 Cpe13g00150 479348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00150 541 Pfam Cytochrome P450 29 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 SUPERFAMILY Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 Gene3D Cytochrome P450 23 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe13g00150 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cpe13g00150 541 PANTHER CYTOCHROME P450 12 516 - -
Cpe13g00150 541 PANTHER CYTOCHROME P450 86A7 12 516 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01173 Cpe-Chr2:10671096 Cpe13g00150 Cpe-Chr13:1093759 0 dispersed
Cpe13g00150 Cpe-Chr13:1093759 Cpe20g00858 Cpe-Chr20:7734937 1.37E-100 dispersed
Cpe12g00850 Cpe-Chr12:7512786 Cpe13g00150 Cpe-Chr13:1093759 2.63E-154 transposed
Cpe19g00567 Cpe-Chr19:4785343 Cpe13g00150 Cpe-Chr13:1093759 5.69E-92 transposed
Cpe12g00374 Cpe-Chr12:2678868 Cpe13g00150 Cpe-Chr13:1093759 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00150 K15398 - csv:101216733 922.154