Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00151 ATGGAGGGCAAAGAAGAGGACGTGAAGCTAGGAGCTAACAAGTACTCCGAAAGACAGCCAATCGGCACATCAGCTCAGACGGACAAGGACTACAAAGAGCCGCCGCCTGCTCCGCTGTACGAGCCCGGCGAGCTCACGTCATGGTCCTTTTACAGAGCCGGAATCGCGGAGTTCGTGGCCACTTTCTTGTTCCTGTACATTACCATCTTGACGGTGATGGGAGTCAGCCGAGCTCCGTCCAAATGCTCCACCGTCGGCATTCAGGGCATCGCGTGGGCCTTCGGTGGCATGATCTTCGCTCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCATATTAATCCGGCGGTGACATTCGGGCTTTTCTTGGCGAGAAAGCTGTCGCTCACCAGAGCCATATTCTACATCATAATGCAATGCCTAGGCGCAATCTGTGGCGCCGGCGTCGTGAAGGGTTTTGAGAAGTCCATCTACGAGCAAAAGCTCGGCGGCGCTAACTTCGTCGCCGCTGGCTACACCAAAGGCAGCGGCCTCGGCGCCGAGATCATCGGCACCTTCGTTCTGGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGAAACGCCAGAGATTCTCACGTCCCTATTTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTCTTGGTTCATTTGGCCACGATTCCGATCACCGGCACCGGCATTAACCCGGCGAGAAGTCTCGGAGCTGCCATTATCTACAACAGGGAACACGCATGGGATGACCATTGGATCTTCTGGGTGGGGCCGTTCATTGGAGCTGCTCTGGCTGCGATTTACCACCAGATCATCATCAGAGCTATTCCATTCAAGGCCAGAGCTTGA 861 55.98 MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLYEPGELTSWSFYRAGIAEFVATFLFLYITILTVMGVSRAPSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEKSIYEQKLGGANFVAAGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNREHAWDDHWIFWVGPFIGAALAAIYHQIIIRAIPFKARA 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1096359 1097819 - Cp4.1LG13g01550.1 Cpe13g00151 479349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00151 286 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Cpe13g00151 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
Cpe13g00151 286 MobiDBLite consensus disorder prediction 1 36 - -
Cpe13g00151 286 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PANTHER AQUAPORIN PIP1-2-RELATED 1 285 - -
Cpe13g00151 286 TIGRFAM MIP: MIP family channel proteins 56 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe13g00151 286 SUPERFAMILY Aquaporin-like 44 278 IPR023271 -
Cpe13g00151 286 ProSitePatterns MIP family signature. 112 120 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01051 Cpe-Chr1:6202540 Cpe13g00151 Cpe-Chr13:1096359 0 dispersed
Cpe08g01215 Cpe-Chr8:8878269 Cpe13g00151 Cpe-Chr13:1096359 3.27E-129 dispersed
Cpe13g00151 Cpe-Chr13:1096359 Cpe16g00536 Cpe-Chr16:6270595 3.76E-142 dispersed
Cpe13g00151 Cpe-Chr13:1096359 Cpe05g00344 Cpe-Chr5:1929953 7.02E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00151 K09872 - csv:101217440 551.206