Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00185 ATGCAAGAAGCTGGGTTGGGAATCATGAATGCTGGTGTGTCTAGCGGTGATGTTTTGGTTTCCGGTGAGGGGGTTCATAATGCCCAACTCAAGGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCCGCTCATGTTGCTTGTCTTCGTGTTGCTACGCCGATTGATAAGCTTCCGATGATCGATGCTCAGCTTTCTCAATCGCATCATGTTTTGCGCTCTTATGCTTCTTCTCATCAAAATGCTCATTCCTTGTCGCCTCATGACCGCCAGGAACTCGACAATTTTCTGGCTCAGTATATGATCGTTTTGTGCTCTTTCAAAGATCAGCTTCAACAGCATGTGAGATTTCACGCAGTGGAGGCTGTTATGGCCTGCCGTGAAATTGAAAGTACTCTACAAGCTCTAACAGGAGTAAACCTTGATGAAGGCACCGGTTTAACAATGTCCGACAATGACGACGACGACGTTCCAATGGATTTCGCACTCGATCAATCTAGCACTGATGCACACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGATCATTAATGGAGAGAGTTCGACAAGAACTAAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGCTACCTGGGGATACAACTACAGTTTTAAAGAACTGGTGGCAGCAACATTCTAAGTGGCCTTACCCAACTGTAAGAAGACGACAAGTCGAAGCTGGTGGAGGAGACGGGTTTACAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATTCTTGAAGTCCAAGCGCAAGAGATAATAAAAACAACAAATTTCATCAAATTATATGAAATATTTTTATAG 933 44.27 MQEAGLGIMNAGVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTVRRRQVEAGGGDGFTAETNKQLVHQPKEEKLAQQLSVSDILEVQAQEIIKTTNFIKLYEIFL 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1447129 1451193 - Cp4.1LG13g01870.1 Cpe13g00185 479383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00185 310 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 250 - -
Cpe13g00185 310 Gene3D - 191 288 - -
Cpe13g00185 310 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 250 - -
Cpe13g00185 310 ProSiteProfiles ELK domain profile. 197 217 IPR005539 GO:0003677
Cpe13g00185 310 SMART KNOX1_2 28 72 IPR005540 GO:0003677|GO:0005634
Cpe13g00185 310 Pfam KNOX2 domain 88 139 IPR005541 GO:0003677|GO:0005634
Cpe13g00185 310 Pfam KNOX1 domain 30 71 IPR005540 GO:0003677|GO:0005634
Cpe13g00185 310 SMART KNOX2_2 85 140 IPR005541 GO:0003677|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00299 Cpe13g00185 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00299 Cpe-Chr5:1679524 Cpe13g00185 Cpe-Chr13:1447129 1.76E-152 dispersed
Cpe06g00313 Cpe-Chr6:1740266 Cpe13g00185 Cpe-Chr13:1447129 4.94E-98 dispersed
Cpe07g00308 Cpe-Chr7:1998675 Cpe13g00185 Cpe-Chr13:1447129 2.13E-87 dispersed
Cpe11g00311 Cpe-Chr11:1683405 Cpe13g00185 Cpe-Chr13:1447129 6.17E-98 dispersed
Cpe13g00185 Cpe-Chr13:1447129 Cpe07g00857 Cpe-Chr7:7771796 5.44E-13 dispersed
Cpe13g00185 Cpe-Chr13:1447129 Cpe05g00298 Cpe-Chr5:1677903 2.13E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00185 - - csv:101206054 437.573