Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe13g00327 | ATGGCTTCGGATCCGAAGGTTCATCTGTTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCATCCTGGAGGCGATGAAGTATTGTTAGCAGCAACTGATAATCCTCTGAGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGACTCGGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATCGATCCATCAACAGTTCCTTTGAGGAAGATTTACATTCCATCACAACAAACACAGTACAATCCAGATAAGACAGCTGAGTTTGTGATTAAAATCTTGCAGATTTTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCTGTTCGTCACTACACCAAGAATGAATGA | 417 | 40.53 | MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLAATDNPLRKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLRKIYIPSQQTQYNPDKTAEFVIKILQILVPIFILGLAFAVRHYTKNE | 138 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2946237 | 2948618 | + | Cp4.1LG13g03230.1 | Cpe13g00327 | 479525 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe13g00327 | 138 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
| Cpe13g00327 | 138 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 85 | IPR001199 | - | |
| Cpe13g00327 | 138 | PANTHER | CYTOCHROME B5 | 1 | 136 | - | - | |
| Cpe13g00327 | 138 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 84 | IPR001199 | - | |
| Cpe13g00327 | 138 | Gene3D | - | 1 | 90 | IPR036400 | - | |
| Cpe13g00327 | 138 | PRINTS | Cytochrome B5 signature | 72 | 84 | IPR001199 | - | |
| Cpe13g00327 | 138 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Cpe13g00327 | 138 | PANTHER | CYTOCHROME B5-LIKE | 1 | 136 | - | - | |
| Cpe13g00327 | 138 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 91 | IPR036400 | - | |
| Cpe13g00327 | 138 | SMART | Cyt_b5_2 | 8 | 85 | IPR001199 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe05g00584 | Cpe13g00327 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe08g00612 | Cpe-Chr8:4042170 | Cpe13g00327 | Cpe-Chr13:2946237 | 5.83E-50 | dispersed | |
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe13g00327 | Cpe-Chr13:2946237 | 7.50E-56 | dispersed | |
| Cpe13g00327 | Cpe-Chr13:2946237 | Cpe15g00137 | Cpe-Chr15:1084099 | 3.39E-52 | dispersed | |
| Cpe13g00327 | Cpe-Chr13:2946237 | Cpe03g01806 | Cpe-Chr3:13533592 | 2.11E-46 | wgd | |
| Cpe13g00327 | Cpe-Chr13:2946237 | Cpe05g00584 | Cpe-Chr5:3539455 | 3.38E-91 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe13g00327 | K23490 | - | csv:101207109 | 255.373 |