Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00454 | ATGAATGGAGATGTAGCTACGGTGGTAACGGCGGCCGCACCGACGGGTTCAGCAGAGCCCCAGTACGTTAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCAATCGCCCAAAACATCAGTTCCGCCCTCGTGAAAATTAACTACTGCGGTCCTGTTTCCATTTCCGCCTACGGTGATACTAATCGCATTCCCAACTCTATTCAGCAAGCTCTCTCCAGTACTGGCATCGCCTTGAATCACGTCCCTGCCGGTGTTAAGGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCGGTCGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCTGGGGATAGAGATTTTTCTAACGCCCTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAGGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTTGTAGCTGGAGGACTCCCAATATCCAGTGCGGAATCATCTCAACTCGTGAACGGTACCCTTACTTCTGACCCTCAAATATCTCAGAACTCTGGACTTGATCATAATCAGCAGACAGCACAAGCTATAGTATACAAACCTGAAAATGTCTCTTTGGGAAACAACAAACATAAAGGTAAATCTATACATAAAAACTCCAACCAACCAGTCCTATCCAGAGCCTTAAGCTCGCCTGTTTCTAGGCACGAGGAAAACCCTAATTTTTTAAACCAACCAAATCATATCCAAGCAAAGCAGTTTAAGAAAGCACCTCATGAATTCTTCGGTAATAGCGGTAATAGCAGTTCTGTAGCCTCTTCTAGTCAGTCTACGCCAAATCTGCTTATTGAAAATTACACTCATGCTAGGACTGATGGTAGTGTTTCAATGGGTAGTTCCTCGAGTTACCAGCCTCCTCACGTCAGGCAAAAAACAATGCAGCTCCATCCTCCTTTTCGGCCAGATTATGTTTTTTCTCCTAACCCCGTTAATCGTAATTCTATCCCAGTCCCTACTCAACCCGATCTCTCTGCACCCAATATCAGTAAGCTGCATATCTCTGATCACCCCAATTATGCTATAAATCCTCAAAATTTTCATCATCAAGCTAGTGAATTTAGACCACATACTACGTCTCAAAACTTTGCCAACTTTAACTCGCCAGACAAAGGCCGTAGTCAGCATGGTAGCCAGTCATTCCATCATGATGCGTTTAATAAACGACATGCTCGTGATGTAGAGTATGCACCTCATTCATCTTCCACCACTCTTGTTAGAAGTTCTTCTTATAATGATGCCTGGGGATCTCAGGGGCAACCACCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAATGGAAAAAATTAGTCCAAATGAGGCAAATATAACTGAGTGCATCCGATATGGAGACTTGAGAAACTGCAATACTGATGTAAAAATGGCACTTAATAGTGCGATAGAGCATAATATGGTAGTGAGGCATAATTTTGGAGCTGTGCAATTGTATGTTGGTAAAACAGAAAAATTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCCAATCAATACCAAAAAGCTATATGGGATAAGATTCAGAATTTTTTGGCTTCTCCAGCTGGTCGTTCTGCAATAATGGCTTCTTCTTGCAGATATCAAGCAGCATTGATTCTAAGGAACGAATGCTTAACCGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGTATATGATAACCTCAATGAAGAAATGGATTACTCATCATATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGGTAATACATATGGAATTTCAAGAACTGAACTTTGA | 1911 | 42.54 | MNGDVATVVTAAAPTGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQRASAPLVAAAKSVWLWMSLVAGGLPISSAESSQLVNGTLTSDPQISQNSGLDHNQQTAQAIVYKPENVSLGNNKHKGKSIHKNSNQPVLSRALSSPVSRHEENPNFLNQPNHIQAKQFKKAPHEFFGNSGNSSSVASSSQSTPNLLIENYTHARTDGSVSMGSSSSYQPPHVRQKTMQLHPPFRPDYVFSPNPVNRNSIPVPTQPDLSAPNISKLHISDHPNYAINPQNFHHQASEFRPHTTSQNFANFNSPDKGRSQHGSQSFHHDAFNKRHARDVEYAPHSSSTTLVRSSSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKMEKISPNEANITECIRYGDLRNCNTDVKMALNSAIEHNMVVRHNFGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIQNFLASPAGRSAIMASSCRYQAALILRNECLTDFALGDVLQILYMITSMKKWITHHISGWQPINIMLTEGNTYGISRTEL | 636 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 4842711 | 4846486 | + | Cp4.1LG13g06360.1 | Cpe13g00454 | 479652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 390 | 416 | - | - | |
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 274 | 293 | - | - | |
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 219 | 261 | - | - | |
Cpe13g00454 | 636 | PANTHER | ACID BINDING PROTEIN, PUTATIVE-RELATED | 15 | 619 | - | - | |
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 233 | 261 | - | - | |
Cpe13g00454 | 636 | Gene3D | - | 21 | 169 | - | - | |
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 277 | 293 | - | - | |
Cpe13g00454 | 636 | CDD | PIN_limkain_b1_N_like | 26 | 150 | - | - | |
Cpe13g00454 | 636 | Pfam | OST-HTH Associated domain | 573 | 625 | IPR025677 | - | |
Cpe13g00454 | 636 | Pfam | NYN domain | 26 | 162 | IPR021139 | GO:0004540 | |
Cpe13g00454 | 636 | PANTHER | LIMKAIN B LKAP | 15 | 619 | IPR024768 | GO:0005777|GO:0010468|GO:1903231 | |
Cpe13g00454 | 636 | MobiDBLite | consensus disorder prediction | 390 | 409 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00448 | Cpe-Chr1:2588442 | Cpe13g00454 | Cpe-Chr13:4842711 | 1.66E-30 | dispersed | |
Cpe13g00454 | Cpe-Chr13:4842711 | Cpe16g00066 | Cpe-Chr16:1293251 | 1.42E-39 | dispersed | |
Cpe13g00454 | Cpe-Chr13:4842711 | Cpe05g01099 | Cpe-Chr5:7330666 | 3.93E-40 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00454 | - | - | cmo:103503825 | 1046.96 |