Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00493 ATGGCGCTCTCTGATAAACCTTCTCGCCAATCTCTCATCCCCAACTTCCTCTACTCTTCCTCTTCTTCCACTCGAACCCTCCCCTTGAAGAAGATGCTTCAGTCTCCACCCACTCTCGATGGCGTTTCTTCTTCTCCTAAGAGCTTTGTCATTCCCGCTCCCAGCGAGCCGTCTAAGAAGATCGAGATGTACTCGCCGGCCTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTCACGCACATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTCGGGGTTTTGCTCAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGCTGGGTGCCTACCCTCCTTGGCTACAGTGCACAGGGTGCCTGCAAGTTTGGCTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAACGAAGTACAAGACCTTGATCTACCTTGCCGGTTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCCTTTGAAGCCGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGACTGTCTGATGGACTTCCCAAATTTGTCAGATCTGAAGGAACACTAGGGTTGTACAAGGGTTTAGTTCCACTATGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATACAAGTATGCCATTCCCAGGCCAAAAGACCAATGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATCGTGTCTCATCCCGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACCGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACTCGTGGGCTACCCCTCCGAATTGTGATGATTGGAACTCTTACTGGTGCTCAATGGGGTATCTACGATGCATTCAAAGTTTTTGTTGGACTACCTACTACTGGTGGCCCTGCACCTGCTGCCCCCGCACCTGCTGCTGCTGAGCTCACAAAGGCGTGA 1107 49.41 MALSDKPSRQSLIPNFLYSSSSSTRTLPLKKMLQSPPTLDGVSSSPKSFVIPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAAAELTKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5069505 5073007 - Cp4.1LG13g05830.1 Cpe13g00493 479691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00493 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 360 IPR044677 GO:0005315|GO:1990547
Cpe13g00493 368 Pfam Mitochondrial carrier protein 167 252 IPR018108 -
Cpe13g00493 368 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Cpe13g00493 368 Gene3D Mitochondrial carrier domain 68 345 IPR023395 -
Cpe13g00493 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cpe13g00493 368 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 360 - -
Cpe13g00493 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cpe13g00493 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cpe13g00493 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01926 Cpe13g00493 CCT
Cpe01g01926 Cpe13g00493 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00457 Cpe-Chr4:5276761 Cpe13g00493 Cpe-Chr13:5069505 0 dispersed
Cpe13g00493 Cpe-Chr13:5069505 Cpe18g00933 Cpe-Chr18:8237124 0 dispersed
Cpe04g00636 Cpe-Chr4:6566803 Cpe13g00493 Cpe-Chr13:5069505 2.65E-89 transposed
Cpe01g01926 Cpe-Chr1:16408764 Cpe13g00493 Cpe-Chr13:5069505 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00493 K15102 - csv:101221771 672.93