Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00510 ATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGTGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAATTATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAAATGCTAG 672 40.18 MEALLQRHVIGFPIGSSVQRLLPDLAGHYNIPSPDSKYPTLKQCSKDSMLSRVNKLGKRADSFAHGVREHVKLGSKITETVKGKLSLGARILQVGGLRKIYKQLFNVGDGEKLLKAVHCYLSTTAGPIAGLLFISTAKIAFCSDRSIKVSSPTGELIRFHYKVLIPVGKIERINQSENVMKPSQKYMEIVTVDNFDFWFMGFLNYRKTLQYLQDVIYQECKKC 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5233766 5236389 + Cp4.1LG13g05820.1 Cpe13g00510 479708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00510 223 Pfam GRAM domain 102 216 IPR004182 -
Cpe13g00510 223 PANTHER GEM-LIKE PROTEIN 2 1 219 IPR037848 -
Cpe13g00510 223 Gene3D - 97 218 IPR011993 -
Cpe13g00510 223 PANTHER GEM-LIKE PROTEIN 4 1 219 - -
Cpe13g00510 223 SMART gram2001c 99 177 IPR004182 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02435 Cpe13g00510 CCT
Cpe01g02435 Cpe13g00510 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01157 Cpe-Chr1:6881104 Cpe13g00510 Cpe-Chr13:5233766 4.67E-67 dispersed
Cpe01g01159 Cpe-Chr1:6887166 Cpe13g00510 Cpe-Chr13:5233766 7.06E-86 dispersed
Cpe09g00493 Cpe-Chr9:3258152 Cpe13g00510 Cpe-Chr13:5233766 1.76E-47 dispersed
Cpe19g00747 Cpe-Chr19:5761245 Cpe13g00510 Cpe-Chr13:5233766 2.97E-39 dispersed
Cpe13g00510 Cpe-Chr13:5233766 Cpe13g00511 Cpe-Chr13:5239927 9.15E-102 tandem
Cpe09g01087 Cpe-Chr9:9407768 Cpe13g00510 Cpe-Chr13:5233766 8.71E-64 transposed
Cpe01g01947 Cpe-Chr1:16567700 Cpe13g00510 Cpe-Chr13:5233766 4.20E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00510 - - cmax:111489685 435.261