Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00517 | ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCTTTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGATGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTCTTCCAACTTACTCGCGAGTTGGGCCACAAATCTGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCCGCTTCACTCCGCGGTGGTGTGGAGCTTTGCAGCAGCGGCGGCGGCGGCTCCGGAGATGGTGATTCAACCGACCGCGGTTTCTCACCCGGCGTCGCTGTTCGTTCAGCAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCTGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGAAGTCATTTTGCTCTATGAACTCTGCTAATTTCGTTGAAGTTCTTCCGCCATTTCAATGGAAATCCATGGCGGAACTCAGCTCTGATGGCTTTCTGGTTATGCTTCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGA | 690 | 52.75 | MSGSDGVNCNNGAIIDLSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGVELCSSGGGGSGDGDSTDRGFSPGVAVRSAAIDGRSVGGESGKLPSRASEFACFFIWWTGKFRPKRQRPPLKSFCSMNSANFVEVLPPFQWKSMAELSSDGFLVMLLFFFFFFFFFFFFFFF | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5277063 | 5278213 | - | Cp4.1LG13g05650.1 | Cpe13g00517 | 479715 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00517 | 229 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
Cpe13g00517 | 229 | PANTHER | TRANSCRIPTION FACTOR TCP21-RELATED | 1 | 111 | - | - | |
Cpe13g00517 | 229 | ProSiteProfiles | TCP domain profile. | 33 | 87 | IPR017887 | - | |
Cpe13g00517 | 229 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 111 | IPR005333 | GO:0003700 | |
Cpe13g00517 | 229 | Pfam | TCP family transcription factor | 33 | 120 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01152 | Cpe-Chr1:6847350 | Cpe13g00517 | Cpe-Chr13:5277063 | 2.82E-54 | dispersed | |
Cpe13g00517 | Cpe-Chr13:5277063 | Cpe20g00029 | Cpe-Chr20:145294 | 2.43E-37 | dispersed | |
Cpe13g00517 | Cpe-Chr13:5277063 | Cpe09g00495 | Cpe-Chr9:3289850 | 4.86E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50411 | PF03634 | TCP | 3.60E-32 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00517 | K16221 | - | twl:120013225 | 171.785 |