Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00520 ATGAGAGAGAGAGAGAGGAAGAGAGAGAAAGCTCTTGATCTCGGCTGCATCAGCTTCGTTCTTCTCTCTCGCTCTCGTTTTCAGTTGATACTTCCACAGCTTGGGAACAAAGCTGTAATGGCGAGCAGATACTGGATGGTCTCTTTACCTGTTCAAGGCTCCGCCTCTTCCCTATGGAATCGCCTTCAAGAGCAAATCTCCAAGCATTCTTTCGATACTCCTCTATACAGACTCAATGTTCCTAATCTCCGCGTAGGAACGCTGGATTCGCTCCTTTCCCTCAGCGATGATCTTCTCAAGTCGAACAGCTTTATGGAAGGAGTTTCCCAGAAAATCAAACGGCAGATCGAGGAACTAGAGAAGGTTTCTGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTATCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATATCGCCTCTGAGAGACATTGTGGATAACATTCACAGTCAAGTGGCCAAGACTGAGGATGACCTGAAGATTCGCGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTAGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTATCTCAGAACATCTAACAACCCTTCTTGTGGTTGTTCCTAAGTACTCACAGAAGGAGTGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAATGAATATGCCCTTTACTCCGTAACACTCTTTAATCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAAGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTTTGAGAAGTTCTTTATTGCAGTGGTCATACGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTTTGTGCCGTACGTGTCTTTGCTGAGAGTATCCTGAGATACGGCTTACCACCATCCTTCTTGGCATCTGTTTTGGCACCATCTGTTAAAAGTGAGAAGAAAGTACGATCAATCCTTGAAGGTTTGTGTGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGCGATGGCTGGTCTGGGGGGAGACTCTGATGCACATCCATATGTCTCCTTCACAATCAATCTTGCCTAA 1248 44.31 MRERERKREKALDLGCISFVLLSRSRFQLILPQLGNKAVMASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRLNVPNLRVGTLDSLLSLSDDLLKSNSFMEGVSQKIKRQIEELEKVSGVESNVLTVDGVPVDSYLTRFVWDEAKYPTISPLRDIVDNIHSQVAKTEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIIISEHLTTLLVVVPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYSVTLFNRVADNFKTSAREKGFQIREFEYSPEAQESRKQELEKLVQDQESLRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGGAMAGLGGDSDAHPYVSFTINLA 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5316513 5323182 - Cp4.1LG13g05610.1 Cpe13g00520 479718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00520 415 Gene3D - 80 351 - -
Cpe13g00520 415 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 40 415 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cpe13g00520 415 SUPERFAMILY Vacuolar ATP synthase subunit C 40 414 IPR036132 GO:0015078|GO:0033180|GO:1902600
Cpe13g00520 415 Gene3D - 202 290 - -
Cpe13g00520 415 Pfam V-ATPase subunit C 44 408 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cpe13g00520 415 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 40 415 - -
Cpe13g00520 415 Gene3D Vacuolar atp synthase subunit c; domain 1 44 373 - -
Cpe13g00520 415 CDD V-ATPase_C 44 412 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01956 Cpe-Chr1:16698528 Cpe13g00520 Cpe-Chr13:5316513 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00520 K02148 - csv:101221574 707.212