Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00526 | TATTGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGACGATCTTTATTGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTTTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCGACGACGAACAAAGAAGTTGATGGACACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAATGTTACAATGCATGCAGATGTGGAAACGGATGAAGTGTATGCCCAGATGACATTACAGCCGCTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCGAGTAGACAGCCAACAAATTACTTTTGCAAGACGTTGACAGCGAGTGATACAAGCACCCATGGAGGTTTCTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTCGAATGGAAGAATGAAAAAAATCAGCTTCTTTTGGGAATACGTCGTGCCACAAGACCACAGACTGTGATGCCCTCTTCTGTTTTATCAAGTGATAGCATGCACATTGGACTCCTGGCTGCTGCAGCTCATGCTGCTGCAACTAATAGCTGTTTCACAGTGTTCTACAACCCCAGGGCTAGCCCATCAGAGTTTGTCATCCCTCTGACAAAGTATGTTAAAGCTGTATTTCATACCCGTGTTTCAGTAGGAATGCGTTTTCGGATGCTTTTTGAAACTGAAGAGTCAAGCGTTCGAAGGTACATGGGTACTATAACTGGAATAAGTGATCTTGACCCTGTTCGTTGGCCGAATTCTCATTGGCGTTCTGTCAAGGTAGGGTGGGACGAGTCAGCAGCTGGCGAGAGGCAGCCAAGGGTATCGTTGTGGGAAATTGAGCCTTTAACTACATTTCCTATGTATCCGTCTCTTTTTCCACTTAGGTTGAAACGTCCATGGCATCCTGGAGTCTCCTCTGTTCATGATAACAGAGATGATGCTTCTAATGGCTTAATGTGGCTTCGGGGAGGAGTCGGGGATCAAGGTCTACACTCACTGAATTTGCAATCCATGGGCTCACTGCCGTGGTTGCAGCAGAGACTCGATTCTCCCATGTTTGGAAATGATCATAATCAGCAGTATCAAGCCATGTTAGCTGCTGGAATGCCGAACCTTGGAGGCGTTGATATGCTGAGACAGCAAATTATGCATCTTCAACAACCTTTCCAATATATTCAACAGGCAGGCTTCCATAACTCTCTATTGCAGCAGCAACAGCAATTGGTTCAACAATCTATGCCTCAGAACATCCTTCAGACACCAAGCCAAGTTATGGCAGAGAATATACCCCAACACATTCTCCAGCAAACTCCACAAAATCAATCAGAGGATATTCCAAACCAGCAGCAGCGTACTTATCATGATACCCTTCAGGTTCAAAGCAATCAATTTCATCAGGGTGAAAATTCAAATGTGCCATCACCCCCATTTCCCAGGACAGAGCTTATGGATTCCAACACAAATTACTCCGAATCCATGATCTCTAGAAGAAATATACTTGCTTCATCGTGTGCTGAAGGGACGGGAAATCTTTCGAATATCTATAGAAGTGGGCAGTCGATCCTAACTGAGCAGTTACCTCAACAATCTCCTGTTTCTAAGAATGCTCATCCACAGGTTGATGCTCACTCGAACTCGATGACATTTCCTCCACCATTTTCTGGTAGAGACTCGATTTTGGAGCTGGGAAATTGTAATTCAGATTCTCCAAGTCGTACACTTTTTGGTGTAAATATTGATTCATCTGGACTTCTACTTCCCTCTAATGTGCCCACTTATGCTTCTCCATCAATTGGTCCTGATTCATCCTCAATGCCAATGGGAGATTCTGGATTTCAAAATTCTATGTACAGTTGTGTCCAAGACTCTTCTGAGTTGTTGCACAGCTCGGGGCAAGTTGATCCATTGAATCCAACTCGGACATTTGTGAAGGTTTACAAATCCGGATCTGTTGGGCGTTCACTAGACATCTCCCGGTTCAGCAGCTATCAGGAGCTGCGAGAGGAGCTGGCTCAGATGTTTGGGATCGAGGGACAGTTGGTAGACCCTCATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGACGTACTTCTCCTTGGAGATGACCCTTGGGAGGCATTTGTGAATAATGTCTGGTATATCAAGATACTCTCTCCCCAGGACTTTCAGAAACTAGGGGTTCAGGCAATTGAGTCCTTCAACCCCGTCGGTGGTCAGCGACTTACCAGTGGTGGCAATGAAGCTGAAAATGTTTCAGGGCTTCCGTCTGTCGGTAGAAATTCGAGTATATGA | 2511 | 45.96 | YWGKLDMKLSTSGFGQQDHEDDLYWGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESAAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGVSSVHDNRDDASNGLMWLRGGVGDQGLHSLNLQSMGSLPWLQQRLDSPMFGNDHNQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIQQAGFHNSLLQQQQQLVQQSMPQNILQTPSQVMAENIPQHILQQTPQNQSEDIPNQQQRTYHDTLQVQSNQFHQGENSNVPSPPFPRTELMDSNTNYSESMISRRNILASSCAEGTGNLSNIYRSGQSILTEQLPQQSPVSKNAHPQVDAHSNSMTFPPPFSGRDSILELGNCNSDSPSRTLFGVNIDSSGLLLPSNVPTYASPSIGPDSSSMPMGDSGFQNSMYSCVQDSSELLHSSGQVDPLNPTRTFVKVYKSGSVGRSLDISRFSSYQELREELAQMFGIEGQLVDPHRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPQDFQKLGVQAIESFNPVGGQRLTSGGNEAENVSGLPSVGRNSSI | 836 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5354326 | 5374176 | - | Cp4.1LG13g05520.1 | Cpe13g00526 | 479724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00526 | 836 | MobiDBLite | consensus disorder prediction | 596 | 625 | - | - | |
Cpe13g00526 | 836 | ProSiteProfiles | PB1 domain profile. | 710 | 795 | IPR000270 | GO:0005515 | |
Cpe13g00526 | 836 | Gene3D | - | 706 | 799 | - | - | |
Cpe13g00526 | 836 | Gene3D | - | 284 | 356 | - | - | |
Cpe13g00526 | 836 | MobiDBLite | consensus disorder prediction | 814 | 836 | - | - | |
Cpe13g00526 | 836 | Pfam | AUX/IAA family | 707 | 794 | IPR033389 | - | |
Cpe13g00526 | 836 | MobiDBLite | consensus disorder prediction | 596 | 622 | - | - | |
Cpe13g00526 | 836 | Gene3D | - | 155 | 220 | IPR015300 | - | |
Cpe13g00526 | 836 | SUPERFAMILY | CAD & PB1 domains | 703 | 784 | - | - | |
Cpe13g00526 | 836 | SUPERFAMILY | DNA-binding pseudobarrel domain | 141 | 249 | IPR015300 | - | |
Cpe13g00526 | 836 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 30 | 208 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Cpe13g00526 | 836 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 209 | 809 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Cpe13g00526 | 836 | PANTHER | AUXIN RESPONSE FACTOR 8 | 209 | 809 | - | - | |
Cpe13g00526 | 836 | PANTHER | AUXIN RESPONSE FACTOR 8 | 30 | 208 | - | - | |
Cpe13g00526 | 836 | Pfam | Auxin response factor | 246 | 329 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe13g00526 | Cpe-Chr13:5354326 | Cpe20g00545 | Cpe-Chr20:3182872 | 0 | dispersed | |
Cpe01g01963 | Cpe-Chr1:16738823 | Cpe13g00526 | Cpe-Chr13:5354326 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00526 | - | - | csv:101208098 | 1490.71 |