Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00544 ATGGAGATGGACAAGAACCTGCCTGAGAATCAACACCTTCTTCAAAAGACCACTAGCTTCACTACCAATGATGACGCCCCCCGATTGGACGGCGCTGATGATGCCGATGTTACTGTTCCTGATCCTGATGCTGCTATTGAGCAATACAATAACGCGGAATCGAATGCGAAGGAGAAACAGTGTCGAGTGCCGGAGGATGAGTCGTCGTTTCTCGAAGCGGTTGATCGGATATCGAAGCTGAACACTGCGATTCACGAAATGAAATTGGAAGAGGAGAAGAATTCGTTGATCAATCGCATAGGGAGTACTCAACAGCGAGCGATTTCTTATTTAGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAAAAATAGAGATGTGGATGTTGACGATACGAAAGGAGATCGTTGTGCAGTACCAGAAGCTGAACCCGATCATCAACAGATTCCAGTTTACTCCAACGAGATCTTGAGCTATTTGAAAAAAATCGCCAATCAAATGATTTCCGGGGGATACGAATCGGAATGCTACCATGTCTACATCGTTGCGAGAAGAAACAAATTCGAAGAGGCCTTGTTGAACCTAGGGTTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGCTGGGAATCAATGGAGTGTGAGATCGGCACATGGATCAGAACCTTCGAGCAATGCGCCATCGTTTTGTTCTCTGGCGAACGGAATCTCGCCGAATCTATATTTTCAGCGCATCCTAAGATTTCCGCCAATCTGTTCAACAACCTAACTCACGGCATTGTGATTCAACTGCTAAATTTCTCAGAAGGTGTTGCAATGACGAAACGCTCCGCCGAGAAGTTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGCGATATGCTCCCAAAAATGGAAAGCTTATTTCCAGAAGAATACGCCGAGGAGCTCAGAACAGAGATCGCAACCACTCGAACTCGTCTAGGCGAAGCGGCGATATGCATATTTTGCGATCTCGAAAACTCGATCAGAGCGGACACCGGAAAAATCCCGGTACCAGGCGGCGCCGTTCATCCATTGGCTCGATACACCATTAACTACTTGAAATACGCTTGCGAGTACAGAACCACACTGGAACAGATATTCAAAGAACACGCAAAGATCGAGCGAGCCGATTCAACAAGTCGACCACGTTACGAAGGCGAACAAGCACCGACTTACAACCCTAACTCTGACAATCAATCACCATTCTCCGTGGAACTGATGCGTGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGACATAGCACTGAGTTCGATTTTCATGATGAACAACGGTCGATACATCTTGCAGAAGATCAAAGGATCTCCAGATATCCACGAACTGGTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATCTTCGTCAATACCACAAGAACTACCAGAGAGAGACGTGGGGGAAATTATTGGGTTATTTGAACCACGAGGGCTTGACCTGGCACGGGAAAGTGAATAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAAACACAGAGCTCGTGGATCATAAGCGACGAACAGCTTCAGTCGGAGCTCCGAGTATCAATATCGGCGGTGATGATTCCGGCGTACAGATCATTCCTGGCTCGGTTTTCGCAGTACTTGGATCCGGGGAGACAAACAGAGAAATACATTAAGCTTCAGCCTGAAGACATAGAAACCTACATAGATGAACTATTCGACGGGAATCCAACCTCCATGGCAAGAAGGAGAACATAA 1812 46.41 MEMDKNLPENQHLLQKTTSFTTNDDAPRLDGADDADVTVPDPDAAIEQYNNAESNAKEKQCRVPEDESSFLEAVDRISKLNTAIHEMKLEEEKNSLINRIGSTQQRAISYLEEEFRFFLEESKNRDVDVDDTKGDRCAVPEAEPDHQQIPVYSNEILSYLKKIANQMISGGYESECYHVYIVARRNKFEEALLNLGFEKHSIDDIQKMSWESMECEIGTWIRTFEQCAIVLFSGERNLAESIFSAHPKISANLFNNLTHGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMLPKMESLFPEEYAEELRTEIATTRTRLGEAAICIFCDLENSIRADTGKIPVPGGAVHPLARYTINYLKYACEYRTTLEQIFKEHAKIERADSTSRPRYEGEQAPTYNPNSDNQSPFSVELMRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSPDIHELVGDTWYRKRSSDLRQYHKNYQRETWGKLLGYLNHEGLTWHGKVNKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDELFDGNPTSMARRRT 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5496933 5499020 - Cp4.1LG13g05350.1 Cpe13g00544 479742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00544 603 MobiDBLite consensus disorder prediction 10 25 - -
Cpe13g00544 603 MobiDBLite consensus disorder prediction 1 40 - -
Cpe13g00544 603 Gene3D Exocyst complex component Exo70 44 601 - -
Cpe13g00544 603 Pfam Exo70 exocyst complex subunit 219 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe13g00544 603 MobiDBLite consensus disorder prediction 386 408 - -
Cpe13g00544 603 PANTHER EXOCYST COMPLEX PROTEIN EXO70 45 602 IPR004140 GO:0000145|GO:0006887
Cpe13g00544 603 SUPERFAMILY Cullin repeat-like 65 592 IPR016159 -
Cpe13g00544 603 MobiDBLite consensus disorder prediction 393 408 - -
Cpe13g00544 603 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 45 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01216 Cpe-Chr3:9914479 Cpe13g00544 Cpe-Chr13:5496933 0 dispersed
Cpe08g00067 Cpe-Chr8:441455 Cpe13g00544 Cpe-Chr13:5496933 0 dispersed
Cpe13g00544 Cpe-Chr13:5496933 Cpe20g00898 Cpe-Chr20:7983527 7.06E-119 dispersed
Cpe01g01977 Cpe-Chr1:16913665 Cpe13g00544 Cpe-Chr13:5496933 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00544 K07195 - csv:101206040 955.666