Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00577 ATGGACTCAAGGGGCCATTCCAATGGTGGAGAACTTGAAACAAAAGAGATGGACATTAGAGACCTTTCATCTTCGCGCAACAATACTCAGTATATTCACAAGGTGGGGGTTCCACCGAAGCAAGGTTTCTTCAACGAATTTAAAGCAAGAGTGAAAGAGACTTTCTTTGCAGATGAGCCTCTGCGAACCTTCAAGGATCAACCGAAGTCCCGAAAGTTGGTCCTGGGAATTCAGGCTATCTTCCCGATATTTGAATGGGGGAGGAATTACAATCTGACAAAATTAAGAGGAGATATAATTGCTGGACTCACTATTGCAAGTCTCTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGTTTATACTCCAGCTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCTAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACAATGCTACAAAAGGAGATTGATTACCATACACATCCAGAAGCGTATCTGCGGCTTGCATTTACAGCTACGTTTTTTGCTGGGATCACCCAAGCCACTCTAGGGATGCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAACTTAAAGGCTTTCTTGGTATTAAAAATTTTACAAAGAAAACAGACATCATCTCTGTTATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACGATAGTCATTGGAGTAGCTTTTCTAAGTTTTCTTCTATTAGCCAAGTATATTGGAAAGAAGAACAAGAGCCTTTTTTGGGTGCCTGCAATTGCTCCATTAATATCAGTCATTCTGTCCACCTTTTTTGTTTACATTACCCATGCAGACCAGAAAGGTGTCGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCTCATCAGTGAAGCAGATCTACTTCACTGGTGAGTACCTCCTTAAAGGGTTCAGGATTGGCGCTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCACTGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAGACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCGAATGCTATTCTAGCTGCCATCATTATCACTGCTGTGATCAACTTAATTGACATTCAGGCAGCAATTTTGCTTTGGAAGATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTTGGTGTGATATTTGCAAATGTTGAGACAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGGGTTGCCATTCTTGGAAAGATCCCTAGGACCACAGTATACAGGAACACCCAACAGTATCCAGAAGCAACAAGGGTTCCGGGCATTCTCATTGTGAGAGTCGACTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAGCAAATAAAGAAGGGTTATTCAACAAAAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTACTGACATTGACACTAGCGGAATTCATGCCCTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTAGTTTTGGCAAACCCCGGGCCTGTAGTGATTGACAAACTCCATGCATCCGATCTTGCTAATCTGATTGGCGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGGGGTCTAG 1977 42.79 MDSRGHSNGGELETKEMDIRDLSSSRNNTQYIHKVGVPPKQGFFNEFKARVKETFFADEPLRTFKDQPKSRKLVLGIQAIFPIFEWGRNYNLTKLRGDIIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTMLQKEIDYHTHPEAYLRLAFTATFFAGITQATLGMLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMRSVFEAAHHGWNWQTIVIGVAFLSFLLLAKYIGKKNKSLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIEKGINPSSVKQIYFTGEYLLKGFRIGAVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSLTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAAIIITAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFANVETGLLIAVSISFAKILLQVTRPRVAILGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKGYSTKTQFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGPVVIDKLHASDLANLIGEDHIFLTVAEAVSSCSPKLVEGV 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5683783 5689593 + Cp4.1LG13g05120.1 Cpe13g00577 479775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00577 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Cpe13g00577 658 PANTHER SULFATE TRANSPORTER 19 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe13g00577 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Cpe13g00577 658 Gene3D STAS domain 507 653 IPR036513 -
Cpe13g00577 658 PANTHER SULFATE TRANSPORTER 1.3 19 658 - -
Cpe13g00577 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Cpe13g00577 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe13g00577 658 Pfam STAS domain 528 646 IPR002645 -
Cpe13g00577 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Cpe13g00577 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02266 Cpe-Chr1:19198200 Cpe13g00577 Cpe-Chr13:5683783 1.19E-110 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe13g00577 Cpe-Chr13:5683783 0 dispersed
Cpe13g00577 Cpe-Chr13:5683783 Cpe17g00570 Cpe-Chr17:4661197 0 dispersed
Cpe15g00240 Cpe-Chr15:2196356 Cpe13g00577 Cpe-Chr13:5683783 0 transposed
Cpe01g02010 Cpe-Chr1:17123361 Cpe13g00577 Cpe-Chr13:5683783 0 wgd
Cpe13g00577 Cpe-Chr13:5683783 Cpe02g00526 Cpe-Chr2:3113853 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00577 K17470 - csv:101212138 1191.02